Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC144NLQ6NUI1 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC144NLQ6NUI1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.31□□□□□ -0.28
CCDC144NLQ6NUI1 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC144NLQ6NUI1 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.31□□□□□ -0.28
CCDC144NLQ6NUI1 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.31□□□□□ -0.28
CCDC144NLQ6NUI1 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC144NLQ6NUI1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.31□□□□□ -0.28
CCDC144NLQ6NUI1 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC144NLQ6NUI1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC144NLQ6NUI1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CCDC144NLQ6NUI1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
CCDC144NLQ6NUI1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC144NLQ6NUI1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
CCDC144NLQ6NUI1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC144NLQ6NUI1 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC144NLQ6NUI1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC144NLQ6NUI1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC144NLQ6NUI1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
CCDC144NLQ6NUI1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC144NLQ6NUI1 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC144NLQ6NUI1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC144NLQ6NUI1 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC144NLQ6NUI1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 UBALD1-205ENST00000590891 2641 ntBASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 ADH5P3-201ENST00000433842 1137 ntBASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC144NLQ6NUI1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 ME2P1-201ENST00000426028 1970 ntBASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 AC254562.1-201ENST00000417586 456 ntBASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 AC004967.1-201ENST00000453589 447 ntBASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.29□□□□□ -0.28
CCDC144NLQ6NUI1 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms