Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TTC39BQ5VTQ0 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TTC39BQ5VTQ0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.08■□□□□ 0.32
TTC39BQ5VTQ0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TTC39BQ5VTQ0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TTC39BQ5VTQ0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.08■□□□□ 0.32
TTC39BQ5VTQ0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.08■□□□□ 0.32
TTC39BQ5VTQ0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.08■□□□□ 0.32
TTC39BQ5VTQ0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TTC39BQ5VTQ0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.08■□□□□ 0.32
TTC39BQ5VTQ0 AC243562.1-201ENST00000560672 389 ntBASIC17.08■□□□□ 0.32
TTC39BQ5VTQ0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.08■□□□□ 0.32
TTC39BQ5VTQ0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.08■□□□□ 0.32
TTC39BQ5VTQ0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.08■□□□□ 0.32
TTC39BQ5VTQ0 AC020765.3-201ENST00000613051 740 ntBASIC17.08■□□□□ 0.32
TTC39BQ5VTQ0 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TTC39BQ5VTQ0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TTC39BQ5VTQ0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TTC39BQ5VTQ0 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.08■□□□□ 0.32
TTC39BQ5VTQ0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TTC39BQ5VTQ0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TTC39BQ5VTQ0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
TTC39BQ5VTQ0 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 AL592309.1-201ENST00000443127 649 ntBASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 IGHV3-62-201ENST00000520057 340 ntBASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 AC008267.7-201ENST00000624570 1194 ntBASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TTC39BQ5VTQ0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 AC007950.2-201ENST00000615045 2347 ntBASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 SPCS2P4-201ENST00000436160 681 ntBASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 AC023141.5-201ENST00000458585 616 ntBASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 AC092183.1-201ENST00000469884 875 ntBASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 AL512652.2-201ENST00000625156 1716 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms