Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.27■□□□□ 0.04
CD47Q08722 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.27■□□□□ 0.04
CD47Q08722 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.27■□□□□ 0.04
CD47Q08722 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD47Q08722 LINC01711-201ENST00000598340 967 ntBASIC15.27■□□□□ 0.04
CD47Q08722 AC073592.4-201ENST00000623827 446 ntBASIC15.27■□□□□ 0.04
CD47Q08722 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD47Q08722 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CD47Q08722 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD47Q08722 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CD47Q08722 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD47Q08722 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.27■□□□□ 0.03
CD47Q08722 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD47Q08722 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
CD47Q08722 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CD47Q08722 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.27■□□□□ 0.03
CD47Q08722 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD47Q08722 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.27■□□□□ 0.03
CD47Q08722 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CD47Q08722 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CD47Q08722 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.27■□□□□ 0.03
CD47Q08722 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD47Q08722 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CD47Q08722 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD47Q08722 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD47Q08722 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD47Q08722 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD47Q08722 SNX33P1-201ENST00000592116 1762 ntBASIC15.26■□□□□ 0.03
CD47Q08722 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD47Q08722 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CD47Q08722 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD47Q08722 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD47Q08722 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CD47Q08722 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.26■□□□□ 0.03
CD47Q08722 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD47Q08722 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD47Q08722 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD47Q08722 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD47Q08722 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.26■□□□□ 0.03
CD47Q08722 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD47Q08722 RBM17P3-201ENST00000417687 1192 ntBASIC15.26■□□□□ 0.03
CD47Q08722 LINC00982-205ENST00000420957 435 ntBASIC15.26■□□□□ 0.03
CD47Q08722 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.26■□□□□ 0.03
CD47Q08722 AC106795.1-205ENST00000512851 1056 ntBASIC15.26■□□□□ 0.03
CD47Q08722 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.26■□□□□ 0.03
CD47Q08722 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.26■□□□□ 0.03
CD47Q08722 AC091304.2-201ENST00000564639 760 ntBASIC15.26■□□□□ 0.03
CD47Q08722 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.26■□□□□ 0.03
CD47Q08722 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.26■□□□□ 0.03
CD47Q08722 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.26■□□□□ 0.03
CD47Q08722 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.26■□□□□ 0.03
CD47Q08722 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.26■□□□□ 0.03
CD47Q08722 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CD47Q08722 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CD47Q08722 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD47Q08722 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD47Q08722 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.26■□□□□ 0.03
CD47Q08722 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD47Q08722 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.26■□□□□ 0.03
CD47Q08722 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD47Q08722 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD47Q08722 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CD47Q08722 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.26■□□□□ 0.03
CD47Q08722 AL512652.2-201ENST00000625156 1716 ntBASIC15.26■□□□□ 0.03
CD47Q08722 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.26■□□□□ 0.03
CD47Q08722 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD47Q08722 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD47Q08722 AC016027.1-202ENST00000607927 1699 ntBASIC15.25■□□□□ 0.03
CD47Q08722 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD47Q08722 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD47Q08722 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD47Q08722 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD47Q08722 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.25■□□□□ 0.03
CD47Q08722 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CD47Q08722 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.25■□□□□ 0.03
CD47Q08722 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD47Q08722 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.25■□□□□ 0.03
CD47Q08722 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD47Q08722 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD47Q08722 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.25■□□□□ 0.03
CD47Q08722 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CD47Q08722 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD47Q08722 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD47Q08722 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.25■□□□□ 0.03
CD47Q08722 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD47Q08722 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD47Q08722 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CD47Q08722 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CD47Q08722 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD47Q08722 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.25■□□□□ 0.03
CD47Q08722 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.25■□□□□ 0.03
CD47Q08722 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.25■□□□□ 0.03
CD47Q08722 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.25■□□□□ 0.03
CD47Q08722 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD47Q08722 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.25■□□□□ 0.03
CD47Q08722 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD47Q08722 MTDHP3-201ENST00000594186 672 ntBASIC15.25■□□□□ 0.03
CD47Q08722 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.25■□□□□ 0.03
CD47Q08722 AL139288.1-201ENST00000623748 933 ntBASIC15.25■□□□□ 0.03
CD47Q08722 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms