Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBE3AQ05086 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE3AQ05086 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.25■□□□□ 0.35
UBE3AQ05086 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
UBE3AQ05086 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.25■□□□□ 0.35
UBE3AQ05086 AC098850.1-201ENST00000419919 790 ntBASIC17.25■□□□□ 0.35
UBE3AQ05086 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
UBE3AQ05086 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.25■□□□□ 0.35
UBE3AQ05086 RARRES2P5-201ENST00000564013 466 ntBASIC17.25■□□□□ 0.35
UBE3AQ05086 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.25■□□□□ 0.35
UBE3AQ05086 WFDC1-204ENST00000613603 549 ntBASIC17.25■□□□□ 0.35
UBE3AQ05086 COX11-210ENST00000639671 696 ntBASIC17.25■□□□□ 0.35
UBE3AQ05086 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
UBE3AQ05086 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE3AQ05086 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
UBE3AQ05086 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBE3AQ05086 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE3AQ05086 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE3AQ05086 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
UBE3AQ05086 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE3AQ05086 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE3AQ05086 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE3AQ05086 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE3AQ05086 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE3AQ05086 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE3AQ05086 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.24■□□□□ 0.35
UBE3AQ05086 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE3AQ05086 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.24■□□□□ 0.35
UBE3AQ05086 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE3AQ05086 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE3AQ05086 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE3AQ05086 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.24■□□□□ 0.35
UBE3AQ05086 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE3AQ05086 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.24■□□□□ 0.35
UBE3AQ05086 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.24■□□□□ 0.35
UBE3AQ05086 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.24■□□□□ 0.35
UBE3AQ05086 AC104596.2-201ENST00000512793 793 ntBASIC17.24■□□□□ 0.35
UBE3AQ05086 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE3AQ05086 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
UBE3AQ05086 AC025048.3-201ENST00000590609 569 ntBASIC17.24■□□□□ 0.35
UBE3AQ05086 AC133552.6-201ENST00000613406 534 ntBASIC17.24■□□□□ 0.35
UBE3AQ05086 MIR8072-201ENST00000614241 80 ntBASIC17.24■□□□□ 0.35
UBE3AQ05086 AC005702.4-201ENST00000618393 416 ntBASIC17.24■□□□□ 0.35
UBE3AQ05086 AL033527.5-201ENST00000641382 801 ntBASIC17.24■□□□□ 0.35
UBE3AQ05086 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE3AQ05086 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE3AQ05086 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE3AQ05086 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
UBE3AQ05086 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE3AQ05086 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.24■□□□□ 0.35
UBE3AQ05086 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE3AQ05086 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.24■□□□□ 0.35
UBE3AQ05086 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
UBE3AQ05086 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE3AQ05086 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.24■□□□□ 0.35
UBE3AQ05086 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
UBE3AQ05086 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
UBE3AQ05086 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.23■□□□□ 0.35
UBE3AQ05086 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
UBE3AQ05086 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBE3AQ05086 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBE3AQ05086 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.23■□□□□ 0.35
UBE3AQ05086 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.23■□□□□ 0.35
UBE3AQ05086 PKD1P5-201ENST00000532415 10291 ntBASIC17.23■□□□□ 0.35
UBE3AQ05086 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBE3AQ05086 AC092068.3-201ENST00000587894 2016 ntBASIC17.23■□□□□ 0.35
UBE3AQ05086 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBE3AQ05086 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.23■□□□□ 0.35
UBE3AQ05086 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE3AQ05086 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
UBE3AQ05086 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE3AQ05086 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE3AQ05086 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.23■□□□□ 0.35
UBE3AQ05086 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBE3AQ05086 OR6D1P-203ENST00000641209 4860 ntBASIC17.23■□□□□ 0.35
UBE3AQ05086 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE3AQ05086 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.23■□□□□ 0.35
UBE3AQ05086 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.23■□□□□ 0.35
UBE3AQ05086 KRT223P-202ENST00000449164 1292 ntBASIC17.23■□□□□ 0.35
UBE3AQ05086 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.23■□□□□ 0.35
UBE3AQ05086 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.23■□□□□ 0.35
UBE3AQ05086 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.23■□□□□ 0.35
UBE3AQ05086 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.23■□□□□ 0.35
UBE3AQ05086 AC092658.1-201ENST00000505836 891 ntBASIC17.23■□□□□ 0.35
UBE3AQ05086 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.23■□□□□ 0.35
UBE3AQ05086 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.23■□□□□ 0.35
UBE3AQ05086 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
UBE3AQ05086 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.23■□□□□ 0.35
UBE3AQ05086 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.23■□□□□ 0.35
UBE3AQ05086 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.23■□□□□ 0.35
UBE3AQ05086 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE3AQ05086 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
UBE3AQ05086 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.23■□□□□ 0.35
UBE3AQ05086 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE3AQ05086 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE3AQ05086 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
UBE3AQ05086 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE3AQ05086 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
UBE3AQ05086 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.23■□□□□ 0.35
UBE3AQ05086 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms