Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA3P83110 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.6■□□□□ 0.57
HTRA3P83110 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
HTRA3P83110 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA3P83110 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
HTRA3P83110 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HTRA3P83110 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA3P83110 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA3P83110 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA3P83110 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC18.6■□□□□ 0.57
HTRA3P83110 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA3P83110 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HTRA3P83110 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC18.6■□□□□ 0.57
HTRA3P83110 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA3P83110 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HTRA3P83110 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA3P83110 CD8B2-202ENST00000417670 633 ntBASIC18.6■□□□□ 0.57
HTRA3P83110 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC18.6■□□□□ 0.57
HTRA3P83110 AC078991.1-201ENST00000437297 610 ntBASIC18.6■□□□□ 0.57
HTRA3P83110 CNN2P10-201ENST00000443067 918 ntBASIC18.6■□□□□ 0.57
HTRA3P83110 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA3P83110 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HTRA3P83110 ALG1L13P-202ENST00000519320 584 ntBASIC18.6■□□□□ 0.57
HTRA3P83110 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.6■□□□□ 0.57
HTRA3P83110 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC18.6■□□□□ 0.57
HTRA3P83110 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC18.6■□□□□ 0.57
HTRA3P83110 AC103691.2-201ENST00000618824 433 ntBASIC18.6■□□□□ 0.57
HTRA3P83110 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC18.6■□□□□ 0.57
HTRA3P83110 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
HTRA3P83110 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA3P83110 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA3P83110 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.6■□□□□ 0.57
HTRA3P83110 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HTRA3P83110 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA3P83110 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.6■□□□□ 0.57
HTRA3P83110 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA3P83110 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA3P83110 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTRA3P83110 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.6■□□□□ 0.57
HTRA3P83110 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTRA3P83110 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTRA3P83110 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTRA3P83110 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.59■□□□□ 0.57
HTRA3P83110 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HTRA3P83110 TARDBPP1-201ENST00000442013 1203 ntBASIC18.59■□□□□ 0.57
HTRA3P83110 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC18.59■□□□□ 0.57
HTRA3P83110 AL157792.1-201ENST00000488281 530 ntBASIC18.59■□□□□ 0.57
HTRA3P83110 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.59■□□□□ 0.57
HTRA3P83110 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
HTRA3P83110 DNM1P51-201ENST00000558149 522 ntBASIC18.59■□□□□ 0.57
HTRA3P83110 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC18.59■□□□□ 0.57
HTRA3P83110 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.59■□□□□ 0.57
HTRA3P83110 ECM1P1-201ENST00000604092 1279 ntBASIC18.59■□□□□ 0.57
HTRA3P83110 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC18.59■□□□□ 0.57
HTRA3P83110 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.59■□□□□ 0.57
HTRA3P83110 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.59■□□□□ 0.57
HTRA3P83110 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HTRA3P83110 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
HTRA3P83110 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTRA3P83110 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HTRA3P83110 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTRA3P83110 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTRA3P83110 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.59■□□□□ 0.57
HTRA3P83110 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTRA3P83110 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
HTRA3P83110 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
HTRA3P83110 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HTRA3P83110 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
HTRA3P83110 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
HTRA3P83110 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
HTRA3P83110 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HTRA3P83110 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
HTRA3P83110 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.58■□□□□ 0.57
HTRA3P83110 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HTRA3P83110 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
HTRA3P83110 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC18.58■□□□□ 0.56
HTRA3P83110 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC18.58■□□□□ 0.56
HTRA3P83110 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.58■□□□□ 0.56
HTRA3P83110 RN7SL596P-201ENST00000582123 288 ntBASIC18.58■□□□□ 0.56
HTRA3P83110 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC18.58■□□□□ 0.56
HTRA3P83110 MIR6842-201ENST00000612539 65 ntBASIC18.58■□□□□ 0.56
HTRA3P83110 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC18.58■□□□□ 0.56
HTRA3P83110 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HTRA3P83110 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HTRA3P83110 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HTRA3P83110 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HTRA3P83110 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
HTRA3P83110 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HTRA3P83110 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HTRA3P83110 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HTRA3P83110 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HTRA3P83110 KRT8P39-201ENST00000396270 1433 ntBASIC18.57■□□□□ 0.56
HTRA3P83110 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HTRA3P83110 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
HTRA3P83110 WIZP1-201ENST00000531444 2299 ntBASIC18.57■□□□□ 0.56
HTRA3P83110 AC135050.7-201ENST00000624508 2218 ntBASIC18.57■□□□□ 0.56
HTRA3P83110 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HTRA3P83110 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HTRA3P83110 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
HTRA3P83110 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms