Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB11AP62491 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB11AP62491 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB11AP62491 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB11AP62491 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB11AP62491 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
RAB11AP62491 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB11AP62491 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB11AP62491 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB11AP62491 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB11AP62491 LINC00982-205ENST00000420957 435 ntBASIC13.39□□□□□ -0.27
RAB11AP62491 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
RAB11AP62491 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB11AP62491 AC096582.2-201ENST00000510860 516 ntBASIC13.39□□□□□ -0.27
RAB11AP62491 AC022616.7-201ENST00000525383 220 ntBASIC13.39□□□□□ -0.27
RAB11AP62491 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.39□□□□□ -0.27
RAB11AP62491 NTF6B-201ENST00000591913 560 ntBASIC13.39□□□□□ -0.27
RAB11AP62491 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
RAB11AP62491 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB11AP62491 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB11AP62491 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
RAB11AP62491 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB11AP62491 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB11AP62491 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB11AP62491 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB11AP62491 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB11AP62491 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB11AP62491 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB11AP62491 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB11AP62491 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB11AP62491 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
RAB11AP62491 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
RAB11AP62491 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB11AP62491 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAB11AP62491 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB11AP62491 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.39□□□□□ -0.27
RAB11AP62491 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAB11AP62491 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
RAB11AP62491 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.39□□□□□ -0.27
RAB11AP62491 FAM45BP-202ENST00000592932 1624 ntBASIC13.39□□□□□ -0.27
RAB11AP62491 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
RAB11AP62491 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB11AP62491 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB11AP62491 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
RAB11AP62491 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 GGT3P-204ENST00000453783 1664 ntBASIC13.38□□□□□ -0.27
RAB11AP62491 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB11AP62491 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 AC243591.1-201ENST00000452967 1364 ntBASIC13.38□□□□□ -0.27
RAB11AP62491 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
RAB11AP62491 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
RAB11AP62491 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
RAB11AP62491 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RAB11AP62491 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 SPDYE21P-201ENST00000413323 827 ntBASIC13.38□□□□□ -0.27
RAB11AP62491 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB11AP62491 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB11AP62491 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB11AP62491 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RAB11AP62491 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB11AP62491 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB11AP62491 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RAB11AP62491 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB11AP62491 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB11AP62491 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 AC148477.5-201ENST00000625164 1645 ntBASIC13.38□□□□□ -0.27
RAB11AP62491 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
RAB11AP62491 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB11AP62491 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB11AP62491 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB11AP62491 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB11AP62491 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms