Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CKS1BP61024 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC11.57□□□□□ -0.56
CKS1BP61024 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS1BP61024 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CKS1BP61024 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CKS1BP61024 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC11.57□□□□□ -0.56
CKS1BP61024 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS1BP61024 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS1BP61024 IGHGP-201ENST00000390555 1178 ntBASIC11.57□□□□□ -0.56
CKS1BP61024 AC096633.1-201ENST00000422446 749 ntBASIC11.57□□□□□ -0.56
CKS1BP61024 AL359075.1-203ENST00000462729 1002 ntBASIC11.57□□□□□ -0.56
CKS1BP61024 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CKS1BP61024 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS1BP61024 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS1BP61024 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC11.57□□□□□ -0.56
CKS1BP61024 AC111152.3-201ENST00000569699 673 ntBASIC11.57□□□□□ -0.56
CKS1BP61024 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC11.57□□□□□ -0.56
CKS1BP61024 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC11.57□□□□□ -0.56
CKS1BP61024 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC11.57□□□□□ -0.56
CKS1BP61024 GPR32P1-201ENST00000601788 811 ntBASIC11.57□□□□□ -0.56
CKS1BP61024 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CKS1BP61024 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC11.57□□□□□ -0.56
CKS1BP61024 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS1BP61024 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CKS1BP61024 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS1BP61024 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CKS1BP61024 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS1BP61024 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC11.57□□□□□ -0.56
CKS1BP61024 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC11.57□□□□□ -0.56
CKS1BP61024 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC11.57□□□□□ -0.56
CKS1BP61024 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS1BP61024 CICP8-201ENST00000455800 2813 ntBASIC11.57□□□□□ -0.56
CKS1BP61024 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CKS1BP61024 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CKS1BP61024 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CKS1BP61024 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CKS1BP61024 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
CKS1BP61024 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS1BP61024 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS1BP61024 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS1BP61024 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CKS1BP61024 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS1BP61024 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CKS1BP61024 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC11.57□□□□□ -0.56
CKS1BP61024 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
CKS1BP61024 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC11.56□□□□□ -0.56
CKS1BP61024 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
CKS1BP61024 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
CKS1BP61024 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC11.56□□□□□ -0.56
CKS1BP61024 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
CKS1BP61024 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.56□□□□□ -0.56
CKS1BP61024 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
CKS1BP61024 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC11.56□□□□□ -0.56
CKS1BP61024 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
CKS1BP61024 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
CKS1BP61024 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
CKS1BP61024 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
CKS1BP61024 COX5BP2-201ENST00000392354 334 ntBASIC11.56□□□□□ -0.56
CKS1BP61024 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC11.56□□□□□ -0.56
CKS1BP61024 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC11.56□□□□□ -0.56
CKS1BP61024 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC11.56□□□□□ -0.56
CKS1BP61024 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC11.56□□□□□ -0.56
CKS1BP61024 COX11P1-201ENST00000489116 835 ntBASIC11.56□□□□□ -0.56
CKS1BP61024 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC11.56□□□□□ -0.56
CKS1BP61024 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC11.56□□□□□ -0.56
CKS1BP61024 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC11.56□□□□□ -0.56
CKS1BP61024 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC11.56□□□□□ -0.56
CKS1BP61024 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 SPEG-225ENST00000617028 815 ntTSL 5 BASIC11.56□□□□□ -0.56
CKS1BP61024 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC11.56□□□□□ -0.56
CKS1BP61024 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC11.56□□□□□ -0.56
CKS1BP61024 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
CKS1BP61024 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC11.56□□□□□ -0.56
CKS1BP61024 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC11.56□□□□□ -0.56
CKS1BP61024 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
CKS1BP61024 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC11.56□□□□□ -0.56
CKS1BP61024 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC11.56□□□□□ -0.56
CKS1BP61024 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms