Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 PPT1-215ENST00000641471 2368 ntBASIC12.79□□□□□ -0.36
ERVFC1-1P60608 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 AC004817.3-201ENST00000602957 2129 ntBASIC12.79□□□□□ -0.36
ERVFC1-1P60608 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 HMGA1P5-201ENST00000412453 271 ntBASIC12.79□□□□□ -0.36
ERVFC1-1P60608 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.79□□□□□ -0.36
ERVFC1-1P60608 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 KRT18P35-201ENST00000510488 1269 ntBASIC12.79□□□□□ -0.36
ERVFC1-1P60608 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 AL512604.3-201ENST00000569583 964 ntBASIC12.79□□□□□ -0.36
ERVFC1-1P60608 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ERVFC1-1P60608 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 AC010460.3-201ENST00000511359 1579 ntBASIC12.78□□□□□ -0.36
ERVFC1-1P60608 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12.78□□□□□ -0.36
ERVFC1-1P60608 AC007663.1-201ENST00000438948 1240 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms