Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.92■□□□□ 0.14
CLCN2P51788 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CLCN2P51788 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.92■□□□□ 0.14
CLCN2P51788 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.92■□□□□ 0.14
CLCN2P51788 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN2P51788 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN2P51788 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.92■□□□□ 0.14
CLCN2P51788 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN2P51788 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CLCN2P51788 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.91■□□□□ 0.14
CLCN2P51788 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN2P51788 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN2P51788 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.91■□□□□ 0.14
CLCN2P51788 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN2P51788 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN2P51788 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN2P51788 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN2P51788 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN2P51788 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN2P51788 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.91■□□□□ 0.14
CLCN2P51788 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.91■□□□□ 0.14
CLCN2P51788 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.91■□□□□ 0.14
CLCN2P51788 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.91■□□□□ 0.14
CLCN2P51788 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.91■□□□□ 0.14
CLCN2P51788 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CLCN2P51788 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
CLCN2P51788 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
CLCN2P51788 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.91■□□□□ 0.14
CLCN2P51788 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN2P51788 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN2P51788 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN2P51788 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN2P51788 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN2P51788 AL122018.1-201ENST00000446607 2310 ntBASIC15.91■□□□□ 0.14
CLCN2P51788 AC023157.3-201ENST00000619086 2088 ntBASIC15.91■□□□□ 0.14
CLCN2P51788 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN2P51788 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CLCN2P51788 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.91■□□□□ 0.14
CLCN2P51788 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CLCN2P51788 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN2P51788 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN2P51788 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN2P51788 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN2P51788 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN2P51788 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CLCN2P51788 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN2P51788 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN2P51788 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN2P51788 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CLCN2P51788 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN2P51788 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.9■□□□□ 0.14
CLCN2P51788 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN2P51788 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN2P51788 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN2P51788 AL645728.1-201ENST00000366221 2101 ntBASIC15.9■□□□□ 0.14
CLCN2P51788 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCN2P51788 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CLCN2P51788 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.9■□□□□ 0.14
CLCN2P51788 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN2P51788 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.9■□□□□ 0.14
CLCN2P51788 PAWRP1-201ENST00000451083 565 ntBASIC15.9■□□□□ 0.14
CLCN2P51788 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.9■□□□□ 0.14
CLCN2P51788 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.9■□□□□ 0.14
CLCN2P51788 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.9■□□□□ 0.14
CLCN2P51788 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.9■□□□□ 0.14
CLCN2P51788 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN2P51788 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN2P51788 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCN2P51788 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN2P51788 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN2P51788 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.9■□□□□ 0.14
CLCN2P51788 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.9■□□□□ 0.14
CLCN2P51788 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN2P51788 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CLCN2P51788 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN2P51788 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.9■□□□□ 0.14
CLCN2P51788 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CLCN2P51788 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCN2P51788 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCN2P51788 AC013268.4-201ENST00000637413 2228 ntBASIC15.9■□□□□ 0.14
CLCN2P51788 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CLCN2P51788 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN2P51788 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCN2P51788 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN2P51788 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCN2P51788 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CLCN2P51788 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.89■□□□□ 0.13
CLCN2P51788 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN2P51788 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCN2P51788 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN2P51788 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CLCN2P51788 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.89■□□□□ 0.13
CLCN2P51788 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CLCN2P51788 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.89■□□□□ 0.13
CLCN2P51788 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CLCN2P51788 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.89■□□□□ 0.13
CLCN2P51788 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN2P51788 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
CLCN2P51788 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN2P51788 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms