Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBP50607 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBP50607 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.28■□□□□ 0.36
TUBP50607 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TUBP50607 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TUBP50607 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBP50607 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBP50607 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
TUBP50607 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TUBP50607 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.28■□□□□ 0.36
TUBP50607 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.28■□□□□ 0.36
TUBP50607 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.28■□□□□ 0.36
TUBP50607 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TUBP50607 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.28■□□□□ 0.36
TUBP50607 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TUBP50607 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.28■□□□□ 0.36
TUBP50607 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.28■□□□□ 0.36
TUBP50607 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TUBP50607 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.27■□□□□ 0.36
TUBP50607 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.27■□□□□ 0.36
TUBP50607 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TUBP50607 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
TUBP50607 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TUBP50607 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TUBP50607 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TUBP50607 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TUBP50607 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TUBP50607 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.27■□□□□ 0.36
TUBP50607 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TUBP50607 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TUBP50607 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TUBP50607 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TUBP50607 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TUBP50607 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TUBP50607 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.27■□□□□ 0.36
TUBP50607 SPDYE7P-202ENST00000420373 878 ntBASIC17.27■□□□□ 0.36
TUBP50607 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.27■□□□□ 0.36
TUBP50607 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.27■□□□□ 0.36
TUBP50607 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.27■□□□□ 0.36
TUBP50607 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.27■□□□□ 0.36
TUBP50607 PRYP6-201ENST00000514804 343 ntBASIC17.27■□□□□ 0.36
TUBP50607 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.27■□□□□ 0.36
TUBP50607 AC026150.2-201ENST00000564693 1156 ntBASIC17.27■□□□□ 0.36
TUBP50607 AL138918.1-201ENST00000568306 659 ntBASIC17.27■□□□□ 0.36
TUBP50607 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.27■□□□□ 0.36
TUBP50607 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TUBP50607 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.27■□□□□ 0.36
TUBP50607 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.27■□□□□ 0.36
TUBP50607 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.27■□□□□ 0.36
TUBP50607 Z92544.3-201ENST00000624747 417 ntBASIC17.27■□□□□ 0.36
TUBP50607 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.27■□□□□ 0.36
TUBP50607 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TUBP50607 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TUBP50607 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TUBP50607 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
TUBP50607 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TUBP50607 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TUBP50607 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
TUBP50607 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
TUBP50607 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TUBP50607 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBP50607 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBP50607 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBP50607 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TUBP50607 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.26■□□□□ 0.35
TUBP50607 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.26■□□□□ 0.35
TUBP50607 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TUBP50607 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.26■□□□□ 0.35
TUBP50607 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBP50607 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TUBP50607 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.26■□□□□ 0.35
TUBP50607 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBP50607 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBP50607 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBP50607 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TUBP50607 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TUBP50607 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
TUBP50607 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBP50607 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TUBP50607 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBP50607 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.26■□□□□ 0.35
TUBP50607 HLA-J-202ENST00000469281 1241 ntBASIC17.26■□□□□ 0.35
TUBP50607 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBP50607 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.26■□□□□ 0.35
TUBP50607 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.26■□□□□ 0.35
TUBP50607 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBP50607 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBP50607 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBP50607 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.26■□□□□ 0.35
TUBP50607 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.26■□□□□ 0.35
TUBP50607 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBP50607 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBP50607 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TUBP50607 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBP50607 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBP50607 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
TUBP50607 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.26■□□□□ 0.35
TUBP50607 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.25■□□□□ 0.35
TUBP50607 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBP50607 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms