Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCAP37840 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SNCAP37840 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNCAP37840 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCAP37840 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCAP37840 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.55□□□□□ -0.24
SNCAP37840 AL645728.1-201ENST00000366221 2101 ntBASIC13.55□□□□□ -0.24
SNCAP37840 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCAP37840 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC13.55□□□□□ -0.24
SNCAP37840 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCAP37840 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCAP37840 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SNCAP37840 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.55□□□□□ -0.24
SNCAP37840 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SNCAP37840 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCAP37840 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNCAP37840 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCAP37840 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCAP37840 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCAP37840 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCAP37840 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCAP37840 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.54□□□□□ -0.24
SNCAP37840 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCAP37840 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SNCAP37840 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.54□□□□□ -0.24
SNCAP37840 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SNCAP37840 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCAP37840 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCAP37840 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCAP37840 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
SNCAP37840 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCAP37840 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCAP37840 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNCAP37840 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
SNCAP37840 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.54□□□□□ -0.24
SNCAP37840 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCAP37840 DRAXINP1-201ENST00000437611 948 ntBASIC13.54□□□□□ -0.24
SNCAP37840 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.54□□□□□ -0.24
SNCAP37840 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNCAP37840 TOB2P1-201ENST00000469761 992 ntBASIC13.54□□□□□ -0.24
SNCAP37840 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.54□□□□□ -0.24
SNCAP37840 AP005901.3-202ENST00000581653 237 ntBASIC13.54□□□□□ -0.24
SNCAP37840 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.54□□□□□ -0.24
SNCAP37840 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.54□□□□□ -0.24
SNCAP37840 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.54□□□□□ -0.24
SNCAP37840 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCAP37840 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCAP37840 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCAP37840 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.54□□□□□ -0.24
SNCAP37840 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.54□□□□□ -0.24
SNCAP37840 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.54□□□□□ -0.24
SNCAP37840 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.54□□□□□ -0.24
SNCAP37840 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.54□□□□□ -0.24
SNCAP37840 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.54□□□□□ -0.24
SNCAP37840 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCAP37840 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.54□□□□□ -0.24
SNCAP37840 AC097637.2-201ENST00000624096 1997 ntBASIC13.54□□□□□ -0.24
SNCAP37840 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCAP37840 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCAP37840 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNCAP37840 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCAP37840 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCAP37840 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.54□□□□□ -0.24
SNCAP37840 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SNCAP37840 NSUN5P1-202ENST00000421140 1535 ntBASIC13.54□□□□□ -0.24
SNCAP37840 NSUN5P2-203ENST00000457352 1529 ntBASIC13.54□□□□□ -0.24
SNCAP37840 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.54□□□□□ -0.24
SNCAP37840 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.54□□□□□ -0.24
SNCAP37840 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCAP37840 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.53□□□□□ -0.24
SNCAP37840 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.53□□□□□ -0.24
SNCAP37840 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SNCAP37840 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.53□□□□□ -0.24
SNCAP37840 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SNCAP37840 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.53□□□□□ -0.24
SNCAP37840 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNCAP37840 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SNCAP37840 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNCAP37840 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNCAP37840 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNCAP37840 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.53□□□□□ -0.24
SNCAP37840 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNCAP37840 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNCAP37840 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
SNCAP37840 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNCAP37840 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNCAP37840 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNCAP37840 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNCAP37840 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNCAP37840 RCN1P2-201ENST00000398357 915 ntBASIC13.53□□□□□ -0.24
SNCAP37840 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SNCAP37840 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNCAP37840 POM121L3P-201ENST00000419331 1163 ntBASIC13.53□□□□□ -0.24
SNCAP37840 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.53□□□□□ -0.24
SNCAP37840 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
SNCAP37840 LINC00265-3P-201ENST00000447588 903 ntBASIC13.53□□□□□ -0.24
SNCAP37840 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNCAP37840 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
SNCAP37840 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.53□□□□□ -0.24
SNCAP37840 AC104819.1-201ENST00000504587 486 ntBASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms