Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
XRCC1P18887 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
XRCC1P18887 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
XRCC1P18887 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
XRCC1P18887 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
XRCC1P18887 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
XRCC1P18887 AC005052.1-201ENST00000625181 2492 ntBASIC16.36■□□□□ 0.21
XRCC1P18887 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.36■□□□□ 0.21
XRCC1P18887 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
XRCC1P18887 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
XRCC1P18887 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
XRCC1P18887 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
XRCC1P18887 AL671277.1-201ENST00000429656 993 ntBASIC16.36■□□□□ 0.21
XRCC1P18887 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.36■□□□□ 0.21
XRCC1P18887 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.36■□□□□ 0.21
XRCC1P18887 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
XRCC1P18887 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.36■□□□□ 0.21
XRCC1P18887 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.36■□□□□ 0.21
XRCC1P18887 AC109635.5-201ENST00000533593 962 ntBASIC16.36■□□□□ 0.21
XRCC1P18887 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
XRCC1P18887 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.36■□□□□ 0.21
XRCC1P18887 MIR3909-201ENST00000579518 119 ntBASIC16.36■□□□□ 0.21
XRCC1P18887 MIR4492-201ENST00000581627 80 ntBASIC16.36■□□□□ 0.21
XRCC1P18887 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
XRCC1P18887 AL009183.1-201ENST00000603760 355 ntBASIC16.36■□□□□ 0.21
XRCC1P18887 AC099522.2-201ENST00000607001 744 ntBASIC16.36■□□□□ 0.21
XRCC1P18887 AC105339.1-204ENST00000636249 355 ntBASIC16.36■□□□□ 0.21
XRCC1P18887 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
XRCC1P18887 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
XRCC1P18887 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
XRCC1P18887 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
XRCC1P18887 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
XRCC1P18887 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
XRCC1P18887 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
XRCC1P18887 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
XRCC1P18887 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.36■□□□□ 0.21
XRCC1P18887 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
XRCC1P18887 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.36■□□□□ 0.21
XRCC1P18887 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
XRCC1P18887 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.36■□□□□ 0.21
XRCC1P18887 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
XRCC1P18887 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
XRCC1P18887 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.36■□□□□ 0.21
XRCC1P18887 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
XRCC1P18887 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.36■□□□□ 0.21
XRCC1P18887 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
XRCC1P18887 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
XRCC1P18887 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
XRCC1P18887 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
XRCC1P18887 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
XRCC1P18887 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
XRCC1P18887 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
XRCC1P18887 AL645728.1-201ENST00000366221 2101 ntBASIC16.36■□□□□ 0.21
XRCC1P18887 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
XRCC1P18887 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.36■□□□□ 0.21
XRCC1P18887 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
XRCC1P18887 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
XRCC1P18887 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.35■□□□□ 0.21
XRCC1P18887 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
XRCC1P18887 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.35■□□□□ 0.21
XRCC1P18887 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.35■□□□□ 0.21
XRCC1P18887 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
XRCC1P18887 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
XRCC1P18887 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
XRCC1P18887 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
XRCC1P18887 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
XRCC1P18887 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.35■□□□□ 0.21
XRCC1P18887 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
XRCC1P18887 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
XRCC1P18887 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
XRCC1P18887 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
XRCC1P18887 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
XRCC1P18887 DBET-201ENST00000630918 3363 ntBASIC16.35■□□□□ 0.21
XRCC1P18887 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
XRCC1P18887 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
XRCC1P18887 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.35■□□□□ 0.21
XRCC1P18887 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
XRCC1P18887 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.35■□□□□ 0.21
XRCC1P18887 PMS2P4-201ENST00000412466 1052 ntBASIC16.35■□□□□ 0.21
XRCC1P18887 AC092474.2-201ENST00000424288 719 ntBASIC16.35■□□□□ 0.21
XRCC1P18887 ADH5P3-201ENST00000433842 1137 ntBASIC16.35■□□□□ 0.21
XRCC1P18887 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.35■□□□□ 0.21
XRCC1P18887 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
XRCC1P18887 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
XRCC1P18887 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.35■□□□□ 0.21
XRCC1P18887 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.35■□□□□ 0.21
XRCC1P18887 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.35■□□□□ 0.21
XRCC1P18887 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
XRCC1P18887 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.35■□□□□ 0.21
XRCC1P18887 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
XRCC1P18887 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
XRCC1P18887 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.35■□□□□ 0.21
XRCC1P18887 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.35■□□□□ 0.21
XRCC1P18887 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
XRCC1P18887 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.35■□□□□ 0.21
XRCC1P18887 AL513210.1-201ENST00000629608 234 ntBASIC16.35■□□□□ 0.21
XRCC1P18887 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
XRCC1P18887 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
XRCC1P18887 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
XRCC1P18887 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms