Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ATF1P18846 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.43□□□□□ -0.1
ATF1P18846 AC023157.3-201ENST00000619086 2088 ntBASIC14.43□□□□□ -0.1
ATF1P18846 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ATF1P18846 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.43□□□□□ -0.1
ATF1P18846 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.43□□□□□ -0.1
ATF1P18846 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.42□□□□□ -0.1
ATF1P18846 PCGF3-213ENST00000620529 1899 ntBASIC14.42□□□□□ -0.1
ATF1P18846 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 PI4KAP1-204ENST00000612579 1703 ntBASIC14.42□□□□□ -0.1
ATF1P18846 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.42□□□□□ -0.1
ATF1P18846 SCARNA2-201ENST00000458748 420 ntBASIC14.42□□□□□ -0.1
ATF1P18846 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.42□□□□□ -0.1
ATF1P18846 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.42□□□□□ -0.1
ATF1P18846 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.42□□□□□ -0.1
ATF1P18846 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
ATF1P18846 REXO1L3P-201ENST00000622202 1288 ntBASIC14.42□□□□□ -0.1
ATF1P18846 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
ATF1P18846 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.42□□□□□ -0.1
ATF1P18846 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.42□□□□□ -0.1
ATF1P18846 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.42□□□□□ -0.1
ATF1P18846 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ATF1P18846 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATF1P18846 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATF1P18846 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ATF1P18846 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATF1P18846 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.41□□□□□ -0.1
ATF1P18846 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ATF1P18846 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATF1P18846 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.41□□□□□ -0.1
ATF1P18846 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ATF1P18846 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ATF1P18846 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.41□□□□□ -0.1
ATF1P18846 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.41□□□□□ -0.1
ATF1P18846 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.41□□□□□ -0.1
ATF1P18846 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ATF1P18846 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.41□□□□□ -0.1
ATF1P18846 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.41□□□□□ -0.1
ATF1P18846 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATF1P18846 TSPY19P-201ENST00000418461 509 ntBASIC14.41□□□□□ -0.1
ATF1P18846 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
ATF1P18846 TSPY18P-201ENST00000441642 509 ntBASIC14.41□□□□□ -0.1
ATF1P18846 HCG4P8-203ENST00000443049 980 ntBASIC14.41□□□□□ -0.1
ATF1P18846 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.41□□□□□ -0.1
ATF1P18846 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ATF1P18846 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.41□□□□□ -0.1
ATF1P18846 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ATF1P18846 AC091304.2-201ENST00000564639 760 ntBASIC14.41□□□□□ -0.1
ATF1P18846 AC091167.2-201ENST00000579581 588 ntBASIC14.41□□□□□ -0.1
ATF1P18846 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.41□□□□□ -0.1
ATF1P18846 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATF1P18846 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.41□□□□□ -0.1
ATF1P18846 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATF1P18846 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
ATF1P18846 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATF1P18846 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ATF1P18846 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ATF1P18846 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.41□□□□□ -0.1
ATF1P18846 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.41□□□□□ -0.1
ATF1P18846 LINC01144-201ENST00000626198 1710 ntBASIC14.41□□□□□ -0.1
ATF1P18846 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ATF1P18846 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATF1P18846 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATF1P18846 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ATF1P18846 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
ATF1P18846 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.41□□□□□ -0.1
ATF1P18846 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.41□□□□□ -0.1
ATF1P18846 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.4□□□□□ -0.1
ATF1P18846 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATF1P18846 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms