Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
CCL4P13236 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCL4P13236 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
CCL4P13236 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.34■□□□□ 0.05
CCL4P13236 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.34■□□□□ 0.05
CCL4P13236 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCL4P13236 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.34■□□□□ 0.05
CCL4P13236 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCL4P13236 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCL4P13236 AP001094.4-201ENST00000579008 2176 ntBASIC15.34■□□□□ 0.05
CCL4P13236 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCL4P13236 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCL4P13236 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CCL4P13236 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CCL4P13236 HIST3H2BA-201ENST00000436555 524 ntBASIC15.34■□□□□ 0.05
CCL4P13236 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.34■□□□□ 0.05
CCL4P13236 ACA64.2-201ENST00000459014 129 ntBASIC15.34■□□□□ 0.05
CCL4P13236 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.34■□□□□ 0.05
CCL4P13236 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.34■□□□□ 0.05
CCL4P13236 KRT17P8-201ENST00000540749 863 ntBASIC15.34■□□□□ 0.05
CCL4P13236 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.34■□□□□ 0.05
CCL4P13236 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.34■□□□□ 0.05
CCL4P13236 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
CCL4P13236 AC025048.3-201ENST00000590609 569 ntBASIC15.34■□□□□ 0.05
CCL4P13236 MIR4321-201ENST00000592276 80 ntBASIC15.34■□□□□ 0.05
CCL4P13236 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.34■□□□□ 0.05
CCL4P13236 AC017083.2-201ENST00000608069 979 ntBASIC15.34■□□□□ 0.05
CCL4P13236 AC099568.2-201ENST00000609194 695 ntBASIC15.34■□□□□ 0.05
CCL4P13236 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.34■□□□□ 0.05
CCL4P13236 AC005702.4-201ENST00000618393 416 ntBASIC15.34■□□□□ 0.05
CCL4P13236 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCL4P13236 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCL4P13236 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCL4P13236 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCL4P13236 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCL4P13236 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CCL4P13236 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCL4P13236 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CCL4P13236 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCL4P13236 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCL4P13236 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCL4P13236 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.33■□□□□ 0.05
CCL4P13236 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCL4P13236 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.33■□□□□ 0.05
CCL4P13236 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CCL4P13236 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.33■□□□□ 0.05
CCL4P13236 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCL4P13236 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCL4P13236 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
CCL4P13236 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCL4P13236 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCL4P13236 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.33■□□□□ 0.04
CCL4P13236 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CCL4P13236 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCL4P13236 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.33■□□□□ 0.04
CCL4P13236 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CCL4P13236 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.33■□□□□ 0.04
CCL4P13236 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCL4P13236 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CCL4P13236 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCL4P13236 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.33■□□□□ 0.04
CCL4P13236 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCL4P13236 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCL4P13236 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.33■□□□□ 0.04
CCL4P13236 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CCL4P13236 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.33■□□□□ 0.04
CCL4P13236 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCL4P13236 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.33■□□□□ 0.04
CCL4P13236 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.33■□□□□ 0.04
CCL4P13236 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.33■□□□□ 0.04
CCL4P13236 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.33■□□□□ 0.04
CCL4P13236 AC074044.1-201ENST00000609673 707 ntBASIC15.33■□□□□ 0.04
CCL4P13236 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCL4P13236 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCL4P13236 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCL4P13236 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCL4P13236 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCL4P13236 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCL4P13236 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCL4P13236 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.33■□□□□ 0.04
CCL4P13236 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.33■□□□□ 0.04
CCL4P13236 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CCL4P13236 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.33■□□□□ 0.04
CCL4P13236 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCL4P13236 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.33■□□□□ 0.04
CCL4P13236 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CCL4P13236 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL4P13236 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL4P13236 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.32■□□□□ 0.04
CCL4P13236 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCL4P13236 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CCL4P13236 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CCL4P13236 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCL4P13236 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCL4P13236 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
CCL4P13236 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CCL4P13236 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCL4P13236 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CCL4P13236 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCL4P13236 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms