Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
THRAP10827 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
THRAP10827 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
THRAP10827 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
THRAP10827 KRT18P28-201ENST00000453838 1332 ntBASIC16.49■□□□□ 0.23
THRAP10827 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
THRAP10827 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.49■□□□□ 0.23
THRAP10827 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
THRAP10827 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
THRAP10827 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
THRAP10827 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.49■□□□□ 0.23
THRAP10827 FAM58CP-201ENST00000435741 640 ntBASIC16.49■□□□□ 0.23
THRAP10827 METTL21AP1-201ENST00000438852 635 ntBASIC16.49■□□□□ 0.23
THRAP10827 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.49■□□□□ 0.23
THRAP10827 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.49■□□□□ 0.23
THRAP10827 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
THRAP10827 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.49■□□□□ 0.23
THRAP10827 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.49■□□□□ 0.23
THRAP10827 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
THRAP10827 AL031432.2-201ENST00000566714 459 ntBASIC16.49■□□□□ 0.23
THRAP10827 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.49■□□□□ 0.23
THRAP10827 AL928711.1-201ENST00000570165 459 ntBASIC16.49■□□□□ 0.23
THRAP10827 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
THRAP10827 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
THRAP10827 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
THRAP10827 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
THRAP10827 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.49■□□□□ 0.23
THRAP10827 AL355385.1-201ENST00000606123 409 ntBASIC16.49■□□□□ 0.23
THRAP10827 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
THRAP10827 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.49■□□□□ 0.23
THRAP10827 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.49■□□□□ 0.23
THRAP10827 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
THRAP10827 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
THRAP10827 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
THRAP10827 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.49■□□□□ 0.23
THRAP10827 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
THRAP10827 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
THRAP10827 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
THRAP10827 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
THRAP10827 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THRAP10827 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THRAP10827 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
THRAP10827 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
THRAP10827 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THRAP10827 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
THRAP10827 ME2P1-201ENST00000426028 1970 ntBASIC16.48■□□□□ 0.23
THRAP10827 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THRAP10827 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.48■□□□□ 0.23
THRAP10827 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
THRAP10827 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
THRAP10827 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
THRAP10827 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THRAP10827 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
THRAP10827 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
THRAP10827 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.48■□□□□ 0.23
THRAP10827 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.48■□□□□ 0.23
THRAP10827 HMGN1P19-201ENST00000436976 333 ntBASIC16.48■□□□□ 0.23
THRAP10827 FAM185BP-201ENST00000443595 716 ntBASIC16.48■□□□□ 0.23
THRAP10827 ACTG1P14-201ENST00000446382 1122 ntBASIC16.48■□□□□ 0.23
THRAP10827 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
THRAP10827 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.48■□□□□ 0.23
THRAP10827 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.48■□□□□ 0.23
THRAP10827 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.48■□□□□ 0.23
THRAP10827 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.48■□□□□ 0.23
THRAP10827 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
THRAP10827 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
THRAP10827 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.48■□□□□ 0.23
THRAP10827 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THRAP10827 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THRAP10827 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
THRAP10827 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
THRAP10827 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
THRAP10827 AC023824.1-201ENST00000562945 2975 ntBASIC16.48■□□□□ 0.23
THRAP10827 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THRAP10827 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
THRAP10827 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THRAP10827 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
THRAP10827 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.48■□□□□ 0.23
THRAP10827 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THRAP10827 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
THRAP10827 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.48■□□□□ 0.23
THRAP10827 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.48■□□□□ 0.23
THRAP10827 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
THRAP10827 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.48■□□□□ 0.23
THRAP10827 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.48■□□□□ 0.23
THRAP10827 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.48■□□□□ 0.23
THRAP10827 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.47■□□□□ 0.23
THRAP10827 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
THRAP10827 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
THRAP10827 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.47■□□□□ 0.23
THRAP10827 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
THRAP10827 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
THRAP10827 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
THRAP10827 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.47■□□□□ 0.23
THRAP10827 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
THRAP10827 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
THRAP10827 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
THRAP10827 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
THRAP10827 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
THRAP10827 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms