Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.97■□□□□ 0.31
CD48P09326 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD48P09326 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CD48P09326 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD48P09326 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD48P09326 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CD48P09326 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.96■□□□□ 0.31
CD48P09326 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD48P09326 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD48P09326 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD48P09326 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD48P09326 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.96■□□□□ 0.31
CD48P09326 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CD48P09326 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD48P09326 AC112504.1-201ENST00000623415 1841 ntBASIC16.96■□□□□ 0.31
CD48P09326 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.96■□□□□ 0.31
CD48P09326 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD48P09326 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD48P09326 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD48P09326 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CD48P09326 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD48P09326 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD48P09326 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.96■□□□□ 0.31
CD48P09326 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD48P09326 PGAM5P1-201ENST00000518923 814 ntBASIC16.96■□□□□ 0.31
CD48P09326 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.96■□□□□ 0.31
CD48P09326 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD48P09326 AL138918.1-201ENST00000568306 659 ntBASIC16.96■□□□□ 0.31
CD48P09326 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD48P09326 AC091812.2-201ENST00000619081 385 ntBASIC16.96■□□□□ 0.31
CD48P09326 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.96■□□□□ 0.31
CD48P09326 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD48P09326 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CD48P09326 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CD48P09326 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.96■□□□□ 0.31
CD48P09326 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.96■□□□□ 0.31
CD48P09326 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CD48P09326 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CD48P09326 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CD48P09326 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CD48P09326 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CD48P09326 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CD48P09326 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD48P09326 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD48P09326 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CD48P09326 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD48P09326 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD48P09326 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.95■□□□□ 0.3
CD48P09326 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.95■□□□□ 0.3
CD48P09326 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD48P09326 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD48P09326 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD48P09326 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD48P09326 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD48P09326 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CD48P09326 AP000347.1-202ENST00000435868 847 ntBASIC16.95■□□□□ 0.3
CD48P09326 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD48P09326 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.95■□□□□ 0.3
CD48P09326 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.95■□□□□ 0.3
CD48P09326 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.95■□□□□ 0.3
CD48P09326 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CD48P09326 AC069224.1-201ENST00000566372 1715 ntBASIC16.95■□□□□ 0.3
CD48P09326 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD48P09326 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD48P09326 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD48P09326 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD48P09326 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.95■□□□□ 0.3
CD48P09326 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD48P09326 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CD48P09326 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CD48P09326 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.94■□□□□ 0.3
CD48P09326 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.94■□□□□ 0.3
CD48P09326 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.94■□□□□ 0.3
CD48P09326 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.94■□□□□ 0.3
CD48P09326 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
CD48P09326 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.94■□□□□ 0.3
CD48P09326 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 AC002056.1-201ENST00000395613 760 ntBASIC16.94■□□□□ 0.3
CD48P09326 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.94■□□□□ 0.3
CD48P09326 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.94■□□□□ 0.3
CD48P09326 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CD48P09326 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.94■□□□□ 0.3
CD48P09326 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.94■□□□□ 0.3
CD48P09326 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.94■□□□□ 0.3
CD48P09326 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CD48P09326 AL161645.1-201ENST00000622716 1255 ntBASIC16.94■□□□□ 0.3
CD48P09326 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CD48P09326 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms