Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
ERCC1P07992 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.59□□□□□ -0.07
ERCC1P07992 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
ERCC1P07992 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.59□□□□□ -0.07
ERCC1P07992 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.59□□□□□ -0.07
ERCC1P07992 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.59□□□□□ -0.07
ERCC1P07992 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.59□□□□□ -0.07
ERCC1P07992 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.59□□□□□ -0.07
ERCC1P07992 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.59□□□□□ -0.07
ERCC1P07992 AC023274.1-201ENST00000418278 595 ntBASIC14.59□□□□□ -0.07
ERCC1P07992 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.59□□□□□ -0.07
ERCC1P07992 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.59□□□□□ -0.07
ERCC1P07992 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.59□□□□□ -0.07
ERCC1P07992 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
ERCC1P07992 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.59□□□□□ -0.07
ERCC1P07992 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.59□□□□□ -0.07
ERCC1P07992 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
ERCC1P07992 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.59□□□□□ -0.07
ERCC1P07992 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.59□□□□□ -0.07
ERCC1P07992 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ERCC1P07992 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ERCC1P07992 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
ERCC1P07992 AC103702.1-201ENST00000548801 2630 ntBASIC14.59□□□□□ -0.07
ERCC1P07992 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
ERCC1P07992 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
ERCC1P07992 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.58□□□□□ -0.07
ERCC1P07992 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.07
ERCC1P07992 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC1P07992 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC1P07992 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC1P07992 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC1P07992 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC1P07992 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC1P07992 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC1P07992 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC1P07992 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC1P07992 GPX1P2-201ENST00000429271 606 ntBASIC14.58□□□□□ -0.08
ERCC1P07992 HCG4B-203ENST00000450128 991 ntBASIC14.58□□□□□ -0.08
ERCC1P07992 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.58□□□□□ -0.08
ERCC1P07992 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC1P07992 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.58□□□□□ -0.08
ERCC1P07992 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.58□□□□□ -0.08
ERCC1P07992 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.58□□□□□ -0.08
ERCC1P07992 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC1P07992 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.58□□□□□ -0.08
ERCC1P07992 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC1P07992 AL691403.2-201ENST00000618460 490 ntBASIC14.58□□□□□ -0.08
ERCC1P07992 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC1P07992 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC1P07992 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC1P07992 AL590787.1-201ENST00000568856 1315 ntBASIC14.58□□□□□ -0.08
ERCC1P07992 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC1P07992 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC1P07992 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC1P07992 ALOX12P2-203ENST00000570921 1945 ntBASIC14.58□□□□□ -0.08
ERCC1P07992 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC1P07992 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC1P07992 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.58□□□□□ -0.08
ERCC1P07992 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC1P07992 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC1P07992 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
ERCC1P07992 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.58□□□□□ -0.08
ERCC1P07992 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC1P07992 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.57□□□□□ -0.08
ERCC1P07992 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.57□□□□□ -0.08
ERCC1P07992 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.57□□□□□ -0.08
ERCC1P07992 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
ERCC1P07992 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERCC1P07992 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERCC1P07992 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.57□□□□□ -0.08
ERCC1P07992 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERCC1P07992 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERCC1P07992 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ERCC1P07992 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ERCC1P07992 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ERCC1P07992 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ERCC1P07992 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms