Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPM3P06753 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.43■□□□□ 0.54
TPM3P06753 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPM3P06753 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TPM3P06753 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPM3P06753 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
TPM3P06753 AL671710.1-201ENST00000610245 2349 ntBASIC18.43■□□□□ 0.54
TPM3P06753 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TPM3P06753 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPM3P06753 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPM3P06753 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPM3P06753 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
TPM3P06753 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.43■□□□□ 0.54
TPM3P06753 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
TPM3P06753 RCN1P2-201ENST00000398357 915 ntBASIC18.43■□□□□ 0.54
TPM3P06753 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
TPM3P06753 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.43■□□□□ 0.54
TPM3P06753 AC114341.1-201ENST00000618070 349 ntBASIC18.43■□□□□ 0.54
TPM3P06753 AC073592.4-201ENST00000623827 446 ntBASIC18.43■□□□□ 0.54
TPM3P06753 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.43■□□□□ 0.54
TPM3P06753 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TPM3P06753 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPM3P06753 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.43■□□□□ 0.54
TPM3P06753 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TPM3P06753 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
TPM3P06753 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TPM3P06753 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
TPM3P06753 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TPM3P06753 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TPM3P06753 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPM3P06753 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TPM3P06753 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TPM3P06753 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM3P06753 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TPM3P06753 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
TPM3P06753 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM3P06753 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM3P06753 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM3P06753 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM3P06753 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.42■□□□□ 0.54
TPM3P06753 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM3P06753 SSR4P1-203ENST00000599569 2260 ntBASIC18.42■□□□□ 0.54
TPM3P06753 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TPM3P06753 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.42■□□□□ 0.54
TPM3P06753 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TPM3P06753 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TPM3P06753 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.42■□□□□ 0.54
TPM3P06753 KRT17P6-201ENST00000453795 1220 ntBASIC18.42■□□□□ 0.54
TPM3P06753 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.42■□□□□ 0.54
TPM3P06753 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.42■□□□□ 0.54
TPM3P06753 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.42■□□□□ 0.54
TPM3P06753 BNIP3P18-201ENST00000593976 575 ntBASIC18.42■□□□□ 0.54
TPM3P06753 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TPM3P06753 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM3P06753 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TPM3P06753 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM3P06753 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM3P06753 TMBIM7P-203ENST00000641617 1718 ntBASIC18.42■□□□□ 0.54
TPM3P06753 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM3P06753 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.42■□□□□ 0.54
TPM3P06753 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM3P06753 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TPM3P06753 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.42■□□□□ 0.54
TPM3P06753 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
TPM3P06753 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM3P06753 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TPM3P06753 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM3P06753 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPM3P06753 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.42■□□□□ 0.54
TPM3P06753 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TPM3P06753 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC18.42■□□□□ 0.54
TPM3P06753 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TPM3P06753 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM3P06753 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM3P06753 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM3P06753 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TPM3P06753 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM3P06753 NSUN5P1-202ENST00000421140 1535 ntBASIC18.41■□□□□ 0.54
TPM3P06753 NSUN5P2-203ENST00000457352 1529 ntBASIC18.41■□□□□ 0.54
TPM3P06753 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TPM3P06753 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.41■□□□□ 0.54
TPM3P06753 MIR648-201ENST00000385046 94 ntBASIC18.41■□□□□ 0.54
TPM3P06753 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.41■□□□□ 0.54
TPM3P06753 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM3P06753 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
TPM3P06753 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.41■□□□□ 0.54
TPM3P06753 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.41■□□□□ 0.54
TPM3P06753 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.41■□□□□ 0.54
TPM3P06753 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.41■□□□□ 0.54
TPM3P06753 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
TPM3P06753 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TPM3P06753 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TPM3P06753 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TPM3P06753 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM3P06753 AL590787.1-201ENST00000568856 1315 ntBASIC18.41■□□□□ 0.54
TPM3P06753 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM3P06753 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM3P06753 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TPM3P06753 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM3P06753 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms