Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
POLR3DP05423 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
POLR3DP05423 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.55■□□□□ 0.72
POLR3DP05423 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.55■□□□□ 0.72
POLR3DP05423 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.55■□□□□ 0.72
POLR3DP05423 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.55■□□□□ 0.72
POLR3DP05423 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.55■□□□□ 0.72
POLR3DP05423 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
POLR3DP05423 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
POLR3DP05423 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR3DP05423 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
POLR3DP05423 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR3DP05423 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR3DP05423 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.54■□□□□ 0.72
POLR3DP05423 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
POLR3DP05423 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR3DP05423 GGT4P-201ENST00000623672 1708 ntBASIC19.54■□□□□ 0.72
POLR3DP05423 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR3DP05423 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR3DP05423 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR3DP05423 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR3DP05423 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
POLR3DP05423 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR3DP05423 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
POLR3DP05423 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.54■□□□□ 0.72
POLR3DP05423 INGX-202ENST00000489074 768 ntBASIC19.54■□□□□ 0.72
POLR3DP05423 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
POLR3DP05423 RNA5SP410-201ENST00000516285 106 ntBASIC19.54■□□□□ 0.72
POLR3DP05423 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.54■□□□□ 0.72
POLR3DP05423 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.54■□□□□ 0.72
POLR3DP05423 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.54■□□□□ 0.72
POLR3DP05423 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.54■□□□□ 0.72
POLR3DP05423 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.54■□□□□ 0.72
POLR3DP05423 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR3DP05423 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR3DP05423 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
POLR3DP05423 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
POLR3DP05423 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR3DP05423 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
POLR3DP05423 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR3DP05423 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR3DP05423 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
POLR3DP05423 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.54■□□□□ 0.72
POLR3DP05423 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR3DP05423 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.53■□□□□ 0.72
POLR3DP05423 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR3DP05423 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR3DP05423 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR3DP05423 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.53■□□□□ 0.72
POLR3DP05423 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
POLR3DP05423 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR3DP05423 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.53■□□□□ 0.72
POLR3DP05423 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR3DP05423 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.53■□□□□ 0.72
POLR3DP05423 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
POLR3DP05423 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.53■□□□□ 0.72
POLR3DP05423 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
POLR3DP05423 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.53■□□□□ 0.72
POLR3DP05423 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR3DP05423 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR3DP05423 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.53■□□□□ 0.72
POLR3DP05423 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.53■□□□□ 0.72
POLR3DP05423 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
POLR3DP05423 FAM220BP-201ENST00000377689 816 ntBASIC19.53■□□□□ 0.72
POLR3DP05423 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.53■□□□□ 0.72
POLR3DP05423 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.53■□□□□ 0.72
POLR3DP05423 AC097493.3-201ENST00000509725 367 ntBASIC19.53■□□□□ 0.72
POLR3DP05423 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.53■□□□□ 0.72
POLR3DP05423 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.53■□□□□ 0.72
POLR3DP05423 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.53■□□□□ 0.72
POLR3DP05423 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR3DP05423 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.53■□□□□ 0.72
POLR3DP05423 AL158211.3-201ENST00000607385 239 ntBASIC19.53■□□□□ 0.72
POLR3DP05423 AL390754.1-201ENST00000619088 582 ntBASIC19.53■□□□□ 0.72
POLR3DP05423 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR3DP05423 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR3DP05423 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR3DP05423 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
POLR3DP05423 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
POLR3DP05423 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR3DP05423 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR3DP05423 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
POLR3DP05423 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR3DP05423 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR3DP05423 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR3DP05423 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
POLR3DP05423 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR3DP05423 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.52■□□□□ 0.72
POLR3DP05423 AC018695.7-201ENST00000624587 2492 ntBASIC19.52■□□□□ 0.72
POLR3DP05423 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR3DP05423 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
POLR3DP05423 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR3DP05423 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR3DP05423 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR3DP05423 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
POLR3DP05423 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR3DP05423 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR3DP05423 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
POLR3DP05423 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR3DP05423 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms