Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H2ABP04908 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H2ABP04908 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HIST1H2ABP04908 GGT4P-201ENST00000623672 1708 ntBASIC15□□□□□ -0.01
HIST1H2ABP04908 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15□□□□□ -0.01
HIST1H2ABP04908 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HIST1H2ABP04908 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H2ABP04908 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H2ABP04908 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HIST1H2ABP04908 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15□□□□□ -0.01
HIST1H2ABP04908 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H2ABP04908 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15□□□□□ -0.01
HIST1H2ABP04908 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15□□□□□ -0.01
HIST1H2ABP04908 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H2ABP04908 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H2ABP04908 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H2ABP04908 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15□□□□□ -0.01
HIST1H2ABP04908 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15□□□□□ -0.01
HIST1H2ABP04908 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15□□□□□ -0.01
HIST1H2ABP04908 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15□□□□□ -0.01
HIST1H2ABP04908 FAM185BP-201ENST00000443595 716 ntBASIC15□□□□□ -0.01
HIST1H2ABP04908 POU5F1P6-201ENST00000466990 990 ntBASIC15□□□□□ -0.01
HIST1H2ABP04908 CXCL1P1-201ENST00000502804 216 ntBASIC15□□□□□ -0.01
HIST1H2ABP04908 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15□□□□□ -0.01
HIST1H2ABP04908 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15□□□□□ -0.01
HIST1H2ABP04908 AP002469.2-201ENST00000531724 424 ntBASIC15□□□□□ -0.01
HIST1H2ABP04908 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15□□□□□ -0.01
HIST1H2ABP04908 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
HIST1H2ABP04908 KRT126P-201ENST00000549467 1181 ntBASIC15□□□□□ -0.01
HIST1H2ABP04908 CD63-210ENST00000550776 870 ntTSL 5 BASIC15□□□□□ -0.01
HIST1H2ABP04908 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15□□□□□ -0.01
HIST1H2ABP04908 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15□□□□□ -0.01
HIST1H2ABP04908 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15□□□□□ -0.01
HIST1H2ABP04908 MIR4515-201ENST00000584082 81 ntBASIC15□□□□□ -0.01
HIST1H2ABP04908 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HIST1H2ABP04908 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15□□□□□ -0.01
HIST1H2ABP04908 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15□□□□□ -0.01
HIST1H2ABP04908 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HIST1H2ABP04908 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H2ABP04908 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H2ABP04908 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HIST1H2ABP04908 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
HIST1H2ABP04908 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HIST1H2ABP04908 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H2ABP04908 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H2ABP04908 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15□□□□□ -0.01
HIST1H2ABP04908 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15□□□□□ -0.01
HIST1H2ABP04908 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H2ABP04908 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H2ABP04908 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15□□□□□ -0.01
HIST1H2ABP04908 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HIST1H2ABP04908 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HIST1H2ABP04908 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HIST1H2ABP04908 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H2ABP04908 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.99□□□□□ -0.01
HIST1H2ABP04908 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 CRYGEP-201ENST00000412192 528 ntBASIC14.99□□□□□ -0.01
HIST1H2ABP04908 TPM4P1-201ENST00000436100 807 ntBASIC14.99□□□□□ -0.01
HIST1H2ABP04908 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 AL513480.1-201ENST00000451731 511 ntBASIC14.99□□□□□ -0.01
HIST1H2ABP04908 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H2ABP04908 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms