Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPNS1P04632 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.32■□□□□ 0.2
CAPNS1P04632 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPNS1P04632 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPNS1P04632 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPNS1P04632 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CAPNS1P04632 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPNS1P04632 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPNS1P04632 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPNS1P04632 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPNS1P04632 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPNS1P04632 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.31■□□□□ 0.2
CAPNS1P04632 MTHFR-217ENST00000641820 1569 ntBASIC16.31■□□□□ 0.2
CAPNS1P04632 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPNS1P04632 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPNS1P04632 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPNS1P04632 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPNS1P04632 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.31■□□□□ 0.2
CAPNS1P04632 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPNS1P04632 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPNS1P04632 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPNS1P04632 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPNS1P04632 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPNS1P04632 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPNS1P04632 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.31■□□□□ 0.2
CAPNS1P04632 SPDYE14P-201ENST00000442619 822 ntBASIC16.31■□□□□ 0.2
CAPNS1P04632 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPNS1P04632 RN7SL589P-201ENST00000481268 310 ntBASIC16.31■□□□□ 0.2
CAPNS1P04632 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPNS1P04632 IGHV3-71-201ENST00000523324 359 ntBASIC16.31■□□□□ 0.2
CAPNS1P04632 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.31■□□□□ 0.2
CAPNS1P04632 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPNS1P04632 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CAPNS1P04632 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPNS1P04632 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPNS1P04632 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPNS1P04632 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPNS1P04632 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPNS1P04632 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPNS1P04632 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CAPNS1P04632 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPNS1P04632 PI4KAP1-204ENST00000612579 1703 ntBASIC16.31■□□□□ 0.2
CAPNS1P04632 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CAPNS1P04632 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPNS1P04632 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPNS1P04632 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPNS1P04632 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.3■□□□□ 0.2
CAPNS1P04632 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CAPNS1P04632 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPNS1P04632 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPNS1P04632 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPNS1P04632 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPNS1P04632 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPNS1P04632 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CAPNS1P04632 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.3■□□□□ 0.2
CAPNS1P04632 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPNS1P04632 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPNS1P04632 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPNS1P04632 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPNS1P04632 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CAPNS1P04632 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.3■□□□□ 0.2
CAPNS1P04632 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPNS1P04632 IGHV3-42-201ENST00000520410 361 ntBASIC16.3■□□□□ 0.2
CAPNS1P04632 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.3■□□□□ 0.2
CAPNS1P04632 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPNS1P04632 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.3■□□□□ 0.2
CAPNS1P04632 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPNS1P04632 STK25P1-201ENST00000585406 838 ntBASIC16.3■□□□□ 0.2
CAPNS1P04632 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPNS1P04632 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.3■□□□□ 0.2
CAPNS1P04632 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CAPNS1P04632 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CAPNS1P04632 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPNS1P04632 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CAPNS1P04632 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPNS1P04632 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPNS1P04632 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPNS1P04632 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPNS1P04632 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPNS1P04632 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CAPNS1P04632 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPNS1P04632 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPNS1P04632 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CAPNS1P04632 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.29■□□□□ 0.2
CAPNS1P04632 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CAPNS1P04632 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CAPNS1P04632 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.29■□□□□ 0.2
CAPNS1P04632 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms