Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LMNAP02545 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
LMNAP02545 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.19■□□□□ 0.34
LMNAP02545 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LMNAP02545 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
LMNAP02545 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LMNAP02545 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LMNAP02545 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
LMNAP02545 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LMNAP02545 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
LMNAP02545 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LMNAP02545 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LMNAP02545 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LMNAP02545 AC008677.1-201ENST00000519230 1561 ntBASIC17.19■□□□□ 0.34
LMNAP02545 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.19■□□□□ 0.34
LMNAP02545 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
LMNAP02545 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LMNAP02545 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.19■□□□□ 0.34
LMNAP02545 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LMNAP02545 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.19■□□□□ 0.34
LMNAP02545 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LMNAP02545 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LMNAP02545 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LMNAP02545 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LMNAP02545 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LMNAP02545 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.18■□□□□ 0.34
LMNAP02545 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LMNAP02545 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
LMNAP02545 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LMNAP02545 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LMNAP02545 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.18■□□□□ 0.34
LMNAP02545 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LMNAP02545 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.18■□□□□ 0.34
LMNAP02545 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LMNAP02545 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LMNAP02545 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.18■□□□□ 0.34
LMNAP02545 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LMNAP02545 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LMNAP02545 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LMNAP02545 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.18■□□□□ 0.34
LMNAP02545 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
LMNAP02545 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
LMNAP02545 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.18■□□□□ 0.34
LMNAP02545 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.18■□□□□ 0.34
LMNAP02545 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.18■□□□□ 0.34
LMNAP02545 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.18■□□□□ 0.34
LMNAP02545 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.18■□□□□ 0.34
LMNAP02545 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.18■□□□□ 0.34
LMNAP02545 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.18■□□□□ 0.34
LMNAP02545 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LMNAP02545 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LMNAP02545 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LMNAP02545 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.18■□□□□ 0.34
LMNAP02545 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.18■□□□□ 0.34
LMNAP02545 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.18■□□□□ 0.34
LMNAP02545 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.18■□□□□ 0.34
LMNAP02545 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
LMNAP02545 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LMNAP02545 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LMNAP02545 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.18■□□□□ 0.34
LMNAP02545 AC060834.1-201ENST00000443027 2032 ntBASIC17.18■□□□□ 0.34
LMNAP02545 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LMNAP02545 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
LMNAP02545 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.17■□□□□ 0.34
LMNAP02545 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMNAP02545 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.17■□□□□ 0.34
LMNAP02545 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMNAP02545 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMNAP02545 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMNAP02545 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.17■□□□□ 0.34
LMNAP02545 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LMNAP02545 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LMNAP02545 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMNAP02545 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LMNAP02545 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
LMNAP02545 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMNAP02545 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMNAP02545 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
LMNAP02545 LINC00982-205ENST00000420957 435 ntBASIC17.17■□□□□ 0.34
LMNAP02545 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.17■□□□□ 0.34
LMNAP02545 U91328.1-201ENST00000437528 223 ntBASIC17.17■□□□□ 0.34
LMNAP02545 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.17■□□□□ 0.34
LMNAP02545 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LMNAP02545 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.17■□□□□ 0.34
LMNAP02545 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMNAP02545 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.17■□□□□ 0.34
LMNAP02545 AC243562.1-201ENST00000560672 389 ntBASIC17.17■□□□□ 0.34
LMNAP02545 AC004233.3-201ENST00000607794 1269 ntBASIC17.17■□□□□ 0.34
LMNAP02545 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
LMNAP02545 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMNAP02545 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LMNAP02545 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.17■□□□□ 0.34
LMNAP02545 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMNAP02545 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LMNAP02545 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMNAP02545 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMNAP02545 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
LMNAP02545 AC132938.6-201ENST00000623828 1655 ntBASIC17.16■□□□□ 0.34
LMNAP02545 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LMNAP02545 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms