Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRUB2O95900 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.15■□□□□ 0.34
TRUB2O95900 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TRUB2O95900 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.14■□□□□ 0.33
TRUB2O95900 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRUB2O95900 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRUB2O95900 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRUB2O95900 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRUB2O95900 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRUB2O95900 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRUB2O95900 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRUB2O95900 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.14■□□□□ 0.33
TRUB2O95900 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.14■□□□□ 0.33
TRUB2O95900 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRUB2O95900 AC093724.1-201ENST00000448659 1027 ntBASIC17.14■□□□□ 0.33
TRUB2O95900 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.14■□□□□ 0.33
TRUB2O95900 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.14■□□□□ 0.33
TRUB2O95900 AC105233.2-201ENST00000523697 349 ntBASIC17.14■□□□□ 0.33
TRUB2O95900 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.14■□□□□ 0.33
TRUB2O95900 AF228730.5-201ENST00000530288 346 ntBASIC17.14■□□□□ 0.33
TRUB2O95900 AP000842.3-202ENST00000569238 1080 ntBASIC17.14■□□□□ 0.33
TRUB2O95900 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.14■□□□□ 0.33
TRUB2O95900 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.14■□□□□ 0.33
TRUB2O95900 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.14■□□□□ 0.33
TRUB2O95900 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.14■□□□□ 0.33
TRUB2O95900 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRUB2O95900 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.14■□□□□ 0.33
TRUB2O95900 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.14■□□□□ 0.33
TRUB2O95900 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
TRUB2O95900 AL592424.1-201ENST00000563624 1536 ntBASIC17.14■□□□□ 0.33
TRUB2O95900 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRUB2O95900 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRUB2O95900 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.14■□□□□ 0.33
TRUB2O95900 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRUB2O95900 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRUB2O95900 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRUB2O95900 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRUB2O95900 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRUB2O95900 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRUB2O95900 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.13■□□□□ 0.33
TRUB2O95900 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TRUB2O95900 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRUB2O95900 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRUB2O95900 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRUB2O95900 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRUB2O95900 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRUB2O95900 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRUB2O95900 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRUB2O95900 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
TRUB2O95900 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
TRUB2O95900 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.13■□□□□ 0.33
TRUB2O95900 UXT-AS1-201ENST00000590504 1525 ntBASIC17.13■□□□□ 0.33
TRUB2O95900 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.13■□□□□ 0.33
TRUB2O95900 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRUB2O95900 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRUB2O95900 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRUB2O95900 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRUB2O95900 MIR346-201ENST00000362234 95 ntBASIC17.13■□□□□ 0.33
TRUB2O95900 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.13■□□□□ 0.33
TRUB2O95900 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.13■□□□□ 0.33
TRUB2O95900 AL627223.1-201ENST00000416693 442 ntBASIC17.13■□□□□ 0.33
TRUB2O95900 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRUB2O95900 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.13■□□□□ 0.33
TRUB2O95900 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.13■□□□□ 0.33
TRUB2O95900 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.13■□□□□ 0.33
TRUB2O95900 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.13■□□□□ 0.33
TRUB2O95900 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.13■□□□□ 0.33
TRUB2O95900 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.13■□□□□ 0.33
TRUB2O95900 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
TRUB2O95900 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.13■□□□□ 0.33
TRUB2O95900 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.13■□□□□ 0.33
TRUB2O95900 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.13■□□□□ 0.33
TRUB2O95900 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRUB2O95900 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.13■□□□□ 0.33
TRUB2O95900 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRUB2O95900 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRUB2O95900 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.13■□□□□ 0.33
TRUB2O95900 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRUB2O95900 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRUB2O95900 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.13■□□□□ 0.33
TRUB2O95900 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRUB2O95900 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRUB2O95900 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.13■□□□□ 0.33
TRUB2O95900 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.12■□□□□ 0.33
TRUB2O95900 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRUB2O95900 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRUB2O95900 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.12■□□□□ 0.33
TRUB2O95900 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRUB2O95900 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRUB2O95900 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRUB2O95900 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRUB2O95900 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRUB2O95900 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRUB2O95900 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRUB2O95900 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.12■□□□□ 0.33
TRUB2O95900 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRUB2O95900 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRUB2O95900 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRUB2O95900 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRUB2O95900 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms