Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSPG5O95196 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CSPG5O95196 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSPG5O95196 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSPG5O95196 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.57■□□□□ 0.4
CSPG5O95196 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSPG5O95196 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSPG5O95196 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSPG5O95196 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.57■□□□□ 0.4
CSPG5O95196 ACA64.2-201ENST00000459014 129 ntBASIC17.57■□□□□ 0.4
CSPG5O95196 RN7SL618P-201ENST00000477850 296 ntBASIC17.57■□□□□ 0.4
CSPG5O95196 DOC2GP-202ENST00000514950 1163 ntBASIC17.57■□□□□ 0.4
CSPG5O95196 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.57■□□□□ 0.4
CSPG5O95196 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.57■□□□□ 0.4
CSPG5O95196 AL079307.3-201ENST00000556114 283 ntBASIC17.57■□□□□ 0.4
CSPG5O95196 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.57■□□□□ 0.4
CSPG5O95196 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.57■□□□□ 0.4
CSPG5O95196 MIR4492-201ENST00000581627 80 ntBASIC17.57■□□□□ 0.4
CSPG5O95196 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CSPG5O95196 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.57■□□□□ 0.4
CSPG5O95196 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSPG5O95196 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CSPG5O95196 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSPG5O95196 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSPG5O95196 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSPG5O95196 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CSPG5O95196 AC108860.2-201ENST00000562760 2183 ntBASIC17.57■□□□□ 0.4
CSPG5O95196 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSPG5O95196 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSPG5O95196 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
CSPG5O95196 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSPG5O95196 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSPG5O95196 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
CSPG5O95196 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CSPG5O95196 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.57■□□□□ 0.4
CSPG5O95196 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CSPG5O95196 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSPG5O95196 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.56■□□□□ 0.4
CSPG5O95196 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSPG5O95196 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CSPG5O95196 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSPG5O95196 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
CSPG5O95196 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSPG5O95196 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSPG5O95196 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSPG5O95196 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSPG5O95196 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSPG5O95196 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSPG5O95196 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.56■□□□□ 0.4
CSPG5O95196 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
CSPG5O95196 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.56■□□□□ 0.4
CSPG5O95196 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSPG5O95196 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CSPG5O95196 AC098614.1-201ENST00000368528 745 ntBASIC17.56■□□□□ 0.4
CSPG5O95196 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSPG5O95196 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSPG5O95196 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.56■□□□□ 0.4
CSPG5O95196 AL080243.2-201ENST00000418783 582 ntBASIC17.56■□□□□ 0.4
CSPG5O95196 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSPG5O95196 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.56■□□□□ 0.4
CSPG5O95196 AL512361.1-201ENST00000554200 418 ntBASIC17.56■□□□□ 0.4
CSPG5O95196 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.56■□□□□ 0.4
CSPG5O95196 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSPG5O95196 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.56■□□□□ 0.4
CSPG5O95196 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSPG5O95196 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CSPG5O95196 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CSPG5O95196 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSPG5O95196 AC092053.1-201ENST00000605787 1936 ntBASIC17.56■□□□□ 0.4
CSPG5O95196 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.56■□□□□ 0.4
CSPG5O95196 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSPG5O95196 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.56■□□□□ 0.4
CSPG5O95196 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CSPG5O95196 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CSPG5O95196 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSPG5O95196 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSPG5O95196 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSPG5O95196 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CSPG5O95196 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.55■□□□□ 0.4
CSPG5O95196 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSPG5O95196 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.55■□□□□ 0.4
CSPG5O95196 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.55■□□□□ 0.4
CSPG5O95196 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CSPG5O95196 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CSPG5O95196 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSPG5O95196 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSPG5O95196 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.55■□□□□ 0.4
CSPG5O95196 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSPG5O95196 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSPG5O95196 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSPG5O95196 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSPG5O95196 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CSPG5O95196 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CSPG5O95196 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.55■□□□□ 0.4
CSPG5O95196 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.55■□□□□ 0.4
CSPG5O95196 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.55■□□□□ 0.4
CSPG5O95196 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSPG5O95196 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.55■□□□□ 0.4
CSPG5O95196 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CSPG5O95196 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms