Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GPC4O75487 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
GPC4O75487 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GPC4O75487 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GPC4O75487 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.48■□□□□ 0.23
GPC4O75487 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
GPC4O75487 MIR4515-201ENST00000584082 81 ntBASIC16.48■□□□□ 0.23
GPC4O75487 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.48■□□□□ 0.23
GPC4O75487 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.48■□□□□ 0.23
GPC4O75487 CYP2A7P1-201ENST00000595391 815 ntBASIC16.48■□□□□ 0.23
GPC4O75487 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.48■□□□□ 0.23
GPC4O75487 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.48■□□□□ 0.23
GPC4O75487 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.48■□□□□ 0.23
GPC4O75487 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
GPC4O75487 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GPC4O75487 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.48■□□□□ 0.23
GPC4O75487 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
GPC4O75487 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
GPC4O75487 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GPC4O75487 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GPC4O75487 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GPC4O75487 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.48■□□□□ 0.23
GPC4O75487 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
GPC4O75487 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
GPC4O75487 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GPC4O75487 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GPC4O75487 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GPC4O75487 AC132872.4-202ENST00000622924 2756 ntBASIC16.48■□□□□ 0.23
GPC4O75487 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.48■□□□□ 0.23
GPC4O75487 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GPC4O75487 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
GPC4O75487 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GPC4O75487 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.47■□□□□ 0.23
GPC4O75487 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.47■□□□□ 0.23
GPC4O75487 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.47■□□□□ 0.23
GPC4O75487 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.47■□□□□ 0.23
GPC4O75487 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GPC4O75487 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GPC4O75487 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GPC4O75487 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
GPC4O75487 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GPC4O75487 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.47■□□□□ 0.23
GPC4O75487 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
GPC4O75487 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GPC4O75487 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
GPC4O75487 AC007967.2-201ENST00000432613 625 ntBASIC16.47■□□□□ 0.23
GPC4O75487 AL591424.1-201ENST00000442569 1213 ntBASIC16.47■□□□□ 0.23
GPC4O75487 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GPC4O75487 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.47■□□□□ 0.23
GPC4O75487 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
GPC4O75487 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.47■□□□□ 0.23
GPC4O75487 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.47■□□□□ 0.23
GPC4O75487 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.47■□□□□ 0.23
GPC4O75487 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GPC4O75487 AC027601.4-201ENST00000611259 610 ntBASIC16.47■□□□□ 0.23
GPC4O75487 FAM197Y3-203ENST00000618346 717 ntBASIC16.47■□□□□ 0.23
GPC4O75487 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GPC4O75487 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
GPC4O75487 AC007950.2-201ENST00000615045 2347 ntBASIC16.47■□□□□ 0.23
GPC4O75487 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GPC4O75487 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
GPC4O75487 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
GPC4O75487 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.47■□□□□ 0.23
GPC4O75487 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GPC4O75487 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
GPC4O75487 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GPC4O75487 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GPC4O75487 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
GPC4O75487 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
GPC4O75487 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.46■□□□□ 0.23
GPC4O75487 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GPC4O75487 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.46■□□□□ 0.23
GPC4O75487 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GPC4O75487 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GPC4O75487 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GPC4O75487 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GPC4O75487 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.46■□□□□ 0.23
GPC4O75487 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
GPC4O75487 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
GPC4O75487 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GPC4O75487 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
GPC4O75487 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
GPC4O75487 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
GPC4O75487 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GPC4O75487 AC012569.1-201ENST00000591191 1524 ntBASIC16.46■□□□□ 0.23
GPC4O75487 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GPC4O75487 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
GPC4O75487 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.46■□□□□ 0.23
GPC4O75487 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
GPC4O75487 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GPC4O75487 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.46■□□□□ 0.23
GPC4O75487 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GPC4O75487 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.46■□□□□ 0.23
GPC4O75487 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GPC4O75487 AL022342.1-201ENST00000400363 863 ntBASIC16.46■□□□□ 0.23
GPC4O75487 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GPC4O75487 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GPC4O75487 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.46■□□□□ 0.23
GPC4O75487 HLA-J-202ENST00000469281 1241 ntBASIC16.46■□□□□ 0.23
GPC4O75487 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms