Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM3O75382 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM3O75382 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.33■□□□□ 0.04
TRIM3O75382 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM3O75382 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.33■□□□□ 0.04
TRIM3O75382 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TRIM3O75382 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
TRIM3O75382 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM3O75382 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.33■□□□□ 0.04
TRIM3O75382 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.33■□□□□ 0.04
TRIM3O75382 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM3O75382 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM3O75382 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM3O75382 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TRIM3O75382 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM3O75382 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM3O75382 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM3O75382 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM3O75382 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM3O75382 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM3O75382 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM3O75382 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM3O75382 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM3O75382 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM3O75382 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRIM3O75382 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM3O75382 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM3O75382 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM3O75382 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
TRIM3O75382 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM3O75382 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM3O75382 AC104640.1-201ENST00000562617 2109 ntBASIC15.32■□□□□ 0.04
TRIM3O75382 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM3O75382 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM3O75382 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM3O75382 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRIM3O75382 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM3O75382 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM3O75382 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM3O75382 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM3O75382 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM3O75382 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM3O75382 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM3O75382 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM3O75382 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRIM3O75382 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM3O75382 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM3O75382 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM3O75382 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM3O75382 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM3O75382 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM3O75382 CEND1P1-201ENST00000451006 455 ntBASIC15.32■□□□□ 0.04
TRIM3O75382 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM3O75382 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.32■□□□□ 0.04
TRIM3O75382 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
TRIM3O75382 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM3O75382 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM3O75382 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM3O75382 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.32■□□□□ 0.04
TRIM3O75382 AP001350.2-201ENST00000625104 1094 ntBASIC15.32■□□□□ 0.04
TRIM3O75382 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRIM3O75382 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM3O75382 AL136379.1-201ENST00000623471 2642 ntBASIC15.32■□□□□ 0.04
TRIM3O75382 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM3O75382 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRIM3O75382 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM3O75382 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM3O75382 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRIM3O75382 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM3O75382 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM3O75382 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.32■□□□□ 0.04
TRIM3O75382 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM3O75382 AC023824.1-201ENST00000562945 2975 ntBASIC15.32■□□□□ 0.04
TRIM3O75382 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM3O75382 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRIM3O75382 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.32■□□□□ 0.04
TRIM3O75382 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRIM3O75382 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM3O75382 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM3O75382 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM3O75382 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM3O75382 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM3O75382 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM3O75382 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM3O75382 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM3O75382 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRIM3O75382 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM3O75382 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms