Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SGCEO43556 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SGCEO43556 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SGCEO43556 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SGCEO43556 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SGCEO43556 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.57□□□□□ -0.08
SGCEO43556 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SGCEO43556 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SGCEO43556 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SGCEO43556 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SGCEO43556 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SGCEO43556 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.56□□□□□ -0.08
SGCEO43556 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.56□□□□□ -0.08
SGCEO43556 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SGCEO43556 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SGCEO43556 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SGCEO43556 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SGCEO43556 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SGCEO43556 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.56□□□□□ -0.08
SGCEO43556 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SGCEO43556 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SGCEO43556 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SGCEO43556 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SGCEO43556 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SGCEO43556 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SGCEO43556 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SGCEO43556 GPAA1P2-202ENST00000606848 1787 ntBASIC14.56□□□□□ -0.08
SGCEO43556 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SGCEO43556 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.56□□□□□ -0.08
SGCEO43556 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SGCEO43556 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SGCEO43556 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SGCEO43556 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.56□□□□□ -0.08
SGCEO43556 AL590627.1-203ENST00000421194 1026 ntBASIC14.56□□□□□ -0.08
SGCEO43556 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.56□□□□□ -0.08
SGCEO43556 RPL13AP23-201ENST00000480739 586 ntBASIC14.56□□□□□ -0.08
SGCEO43556 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.56□□□□□ -0.08
SGCEO43556 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
SGCEO43556 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.56□□□□□ -0.08
SGCEO43556 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.56□□□□□ -0.08
SGCEO43556 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.56□□□□□ -0.08
SGCEO43556 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.56□□□□□ -0.08
SGCEO43556 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SGCEO43556 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SGCEO43556 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SGCEO43556 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SGCEO43556 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SGCEO43556 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
SGCEO43556 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SGCEO43556 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SGCEO43556 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SGCEO43556 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SGCEO43556 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SGCEO43556 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SGCEO43556 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SGCEO43556 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SGCEO43556 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.56□□□□□ -0.08
SGCEO43556 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
SGCEO43556 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.55□□□□□ -0.08
SGCEO43556 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SGCEO43556 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.55□□□□□ -0.08
SGCEO43556 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
SGCEO43556 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SGCEO43556 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SGCEO43556 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.55□□□□□ -0.08
SGCEO43556 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SGCEO43556 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.55□□□□□ -0.08
SGCEO43556 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.55□□□□□ -0.08
SGCEO43556 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.55□□□□□ -0.08
SGCEO43556 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
SGCEO43556 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SGCEO43556 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SGCEO43556 AC006449.5-201ENST00000610658 2098 ntBASIC14.55□□□□□ -0.08
SGCEO43556 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SGCEO43556 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SGCEO43556 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.55□□□□□ -0.08
SGCEO43556 HMGA1P7-201ENST00000406908 502 ntBASIC14.55□□□□□ -0.08
SGCEO43556 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SGCEO43556 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.55□□□□□ -0.08
SGCEO43556 AC034105.1-201ENST00000563488 319 ntBASIC14.55□□□□□ -0.08
SGCEO43556 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.55□□□□□ -0.08
SGCEO43556 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.55□□□□□ -0.08
SGCEO43556 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.55□□□□□ -0.08
SGCEO43556 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.55□□□□□ -0.08
SGCEO43556 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SGCEO43556 AC007064.4-201ENST00000637740 555 ntBASIC14.55□□□□□ -0.08
SGCEO43556 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
SGCEO43556 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.55□□□□□ -0.08
SGCEO43556 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.55□□□□□ -0.08
SGCEO43556 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SGCEO43556 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SGCEO43556 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SGCEO43556 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.55□□□□□ -0.08
SGCEO43556 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SGCEO43556 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SGCEO43556 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SGCEO43556 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.55□□□□□ -0.08
SGCEO43556 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SGCEO43556 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.55□□□□□ -0.08
SGCEO43556 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms