Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CHD1O14646 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CHD1O14646 TP73-209ENST00000603362 1668 ntTSL 5 BASIC25.82■■□□□ 1.72
CHD1O14646 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC25.82■■□□□ 1.72
CHD1O14646 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
CHD1O14646 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CHD1O14646 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CHD1O14646 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CHD1O14646 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
CHD1O14646 ACKR1-201ENST00000368121 1240 ntBASIC25.82■■□□□ 1.72
CHD1O14646 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
CHD1O14646 KRT18P25-201ENST00000508931 1278 ntBASIC25.82■■□□□ 1.72
CHD1O14646 AC024681.1-201ENST00000521917 487 ntBASIC25.82■■□□□ 1.72
CHD1O14646 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CHD1O14646 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC25.82■■□□□ 1.72
CHD1O14646 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHD1O14646 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHD1O14646 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC25.81■■□□□ 1.72
CHD1O14646 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHD1O14646 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC25.81■■□□□ 1.72
CHD1O14646 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC25.81■■□□□ 1.72
CHD1O14646 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CHD1O14646 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHD1O14646 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHD1O14646 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
CHD1O14646 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC25.81■■□□□ 1.72
CHD1O14646 CTBP2P4-201ENST00000513884 920 ntBASIC25.81■■□□□ 1.72
CHD1O14646 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC25.81■■□□□ 1.72
CHD1O14646 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC25.81■■□□□ 1.72
CHD1O14646 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC25.81■■□□□ 1.72
CHD1O14646 CDK7-214ENST00000626796 358 ntTSL 5 BASIC25.81■■□□□ 1.72
CHD1O14646 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC25.81■■□□□ 1.72
CHD1O14646 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
CHD1O14646 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHD1O14646 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
CHD1O14646 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHD1O14646 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHD1O14646 AC092068.3-201ENST00000587894 2016 ntBASIC25.81■■□□□ 1.72
CHD1O14646 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
CHD1O14646 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
CHD1O14646 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CHD1O14646 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC25.8■■□□□ 1.72
CHD1O14646 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC25.8■■□□□ 1.72
CHD1O14646 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC25.8■■□□□ 1.72
CHD1O14646 AC234782.1-201ENST00000451950 919 ntBASIC25.8■■□□□ 1.72
CHD1O14646 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC25.8■■□□□ 1.72
CHD1O14646 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC25.8■■□□□ 1.72
CHD1O14646 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
CHD1O14646 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC25.8■■□□□ 1.72
CHD1O14646 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
CHD1O14646 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
CHD1O14646 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHD1O14646 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC25.8■■□□□ 1.72
CHD1O14646 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC25.8■■□□□ 1.72
CHD1O14646 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHD1O14646 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHD1O14646 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHD1O14646 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC25.8■■□□□ 1.72
CHD1O14646 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHD1O14646 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC25.8■■□□□ 1.72
CHD1O14646 MSRA-203ENST00000441698 788 ntTSL 2 BASIC25.8■■□□□ 1.72
CHD1O14646 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC25.8■■□□□ 1.72
CHD1O14646 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC25.8■■□□□ 1.72
CHD1O14646 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC25.8■■□□□ 1.72
CHD1O14646 AC011491.1-203ENST00000637688 543 ntBASIC25.8■■□□□ 1.72
CHD1O14646 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CHD1O14646 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHD1O14646 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC25.79■■□□□ 1.72
CHD1O14646 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHD1O14646 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHD1O14646 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHD1O14646 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC25.79■■□□□ 1.72
CHD1O14646 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHD1O14646 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHD1O14646 BICD1-207ENST00000551848 1962 ntBASIC25.79■■□□□ 1.72
CHD1O14646 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHD1O14646 SMS-201ENST00000379404 1174 ntTSL 3 BASIC25.79■■□□□ 1.72
CHD1O14646 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC25.79■■□□□ 1.72
CHD1O14646 AC116345.2-201ENST00000512837 523 ntBASIC25.79■■□□□ 1.72
CHD1O14646 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
CHD1O14646 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC25.79■■□□□ 1.72
CHD1O14646 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHD1O14646 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC25.79■■□□□ 1.72
CHD1O14646 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC25.79■■□□□ 1.72
CHD1O14646 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CHD1O14646 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CHD1O14646 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CHD1O14646 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC25.78■■□□□ 1.72
CHD1O14646 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
CHD1O14646 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC25.78■■□□□ 1.72
CHD1O14646 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC25.78■■□□□ 1.72
CHD1O14646 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC25.78■■□□□ 1.72
CHD1O14646 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
CHD1O14646 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CHD1O14646 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC25.78■■□□□ 1.72
CHD1O14646 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
CHD1O14646 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC25.78■■□□□ 1.72
CHD1O14646 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CHD1O14646 AP003171.2-201ENST00000528208 925 ntBASIC25.77■■□□□ 1.72
CHD1O14646 RNF41-210ENST00000552244 716 ntTSL 3 BASIC25.77■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms