Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC66A2RUB6 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC66A2RUB6 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC66A2RUB6 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC66A2RUB6 LINC00895-201ENST00000629028 1637 ntBASIC17.83■□□□□ 0.45
CCDC66A2RUB6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC66A2RUB6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC66A2RUB6 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC66A2RUB6 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC66A2RUB6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC66A2RUB6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
CCDC66A2RUB6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC66A2RUB6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC66A2RUB6 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 ABCD1P5-201ENST00000445663 754 ntBASIC17.83■□□□□ 0.44
CCDC66A2RUB6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 AL122018.1-201ENST00000446607 2310 ntBASIC17.83■□□□□ 0.44
CCDC66A2RUB6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.83■□□□□ 0.44
CCDC66A2RUB6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
CCDC66A2RUB6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.82■□□□□ 0.44
CCDC66A2RUB6 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 AC023908.3-201ENST00000564211 3047 ntBASIC17.82■□□□□ 0.44
CCDC66A2RUB6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 LINC00982-205ENST00000420957 435 ntBASIC17.82■□□□□ 0.44
CCDC66A2RUB6 HLA-J-202ENST00000469281 1241 ntBASIC17.82■□□□□ 0.44
CCDC66A2RUB6 AC012615.1-201ENST00000565797 1299 ntBASIC17.82■□□□□ 0.44
CCDC66A2RUB6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 AC091076.1-201ENST00000610741 619 ntBASIC17.82■□□□□ 0.44
CCDC66A2RUB6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 AP000550.4-202ENST00000639755 178 ntBASIC17.82■□□□□ 0.44
CCDC66A2RUB6 AC079776.2-201ENST00000641154 1609 ntBASIC17.82■□□□□ 0.44
CCDC66A2RUB6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 AC005089.1-201ENST00000619486 2241 ntBASIC17.82■□□□□ 0.44
CCDC66A2RUB6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC66A2RUB6 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms