Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 BX276092.5-203ENST00000456199 560 ntBASIC14.29□□□□□ -0.12
SHISA3A0PJX4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 Z69720.1-201ENST00000601483 472 ntBASIC14.29□□□□□ -0.12
SHISA3A0PJX4 AL139424.1-201ENST00000607572 797 ntBASIC14.29□□□□□ -0.12
SHISA3A0PJX4 AL121672.3-201ENST00000608644 468 ntBASIC14.29□□□□□ -0.12
SHISA3A0PJX4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 DRAXINP1-201ENST00000437611 948 ntBASIC14.28□□□□□ -0.12
SHISA3A0PJX4 AP002383.4-201ENST00000442518 975 ntBASIC14.28□□□□□ -0.12
SHISA3A0PJX4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 TOB2P1-201ENST00000469761 992 ntBASIC14.28□□□□□ -0.12
SHISA3A0PJX4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 AC107918.2-201ENST00000530817 355 ntBASIC14.28□□□□□ -0.12
SHISA3A0PJX4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 AC007191.1-201ENST00000623179 2995 ntBASIC14.28□□□□□ -0.12
SHISA3A0PJX4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 LINC00552-201ENST00000625151 2579 ntBASIC14.28□□□□□ -0.12
SHISA3A0PJX4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.28□□□□□ -0.12
SHISA3A0PJX4 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SHISA3A0PJX4 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SHISA3A0PJX4 AC005089.1-201ENST00000619486 2241 ntBASIC14.27□□□□□ -0.12
SHISA3A0PJX4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SHISA3A0PJX4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SHISA3A0PJX4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SHISA3A0PJX4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.27□□□□□ -0.12
SHISA3A0PJX4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.27□□□□□ -0.12
SHISA3A0PJX4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SHISA3A0PJX4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.27□□□□□ -0.12
SHISA3A0PJX4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.27□□□□□ -0.12
SHISA3A0PJX4 AC007292.2-201ENST00000593524 1812 ntBASIC14.27□□□□□ -0.12
SHISA3A0PJX4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms