Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 PCGF3-213ENST00000620529 1899 ntBASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 GPAA1P2-202ENST00000606848 1787 ntBASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRGV1A0A0A0MS02 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 GCK-209ENST00000616242 2260 ntTSL 5 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 MTRF1LP2-201ENST00000506027 1122 ntBASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 AL121894.2-201ENST00000602977 491 ntBASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 GGT4P-201ENST00000623672 1708 ntBASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 CASK-202ENST00000378158 3848 ntTSL 5 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 NID2-208ENST00000617139 3827 ntTSL 5 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 AC104109.2-201ENST00000602919 1418 ntBASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC11.94□□□□□ -0.5
TRGV1A0A0A0MS02 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms