Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 AL590627.1-203ENST00000421194 1026 ntBASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 HCG4B-203ENST00000450128 991 ntBASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 AL513480.1-201ENST00000451731 511 ntBASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 MIR4515-201ENST00000584082 81 ntBASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 WT1-AS_2.1-201ENST00000613208 137 ntBASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 AL645728.2-201ENST00000641974 660 ntBASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 SNX33P1-201ENST00000592116 1762 ntBASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 IGLL3P-201ENST00000412472 434 ntBASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 RPL13AP23-201ENST00000480739 586 ntBASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 MTRF1LP2-201ENST00000506027 1122 ntBASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 AC096734.2-201ENST00000562054 433 ntBASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 BX640515.1-201ENST00000617215 977 ntBASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 ZNF259P1-201ENST00000407656 1365 ntBASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DRB4X5D2U9 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
HLA-DRB4X5D2U9 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
HLA-DRB4X5D2U9 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms