Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB4Q9UN71 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PCDHGB4Q9UN71 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB4Q9UN71 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB4Q9UN71 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 SNX18-202ENST00000343017 3140 ntBASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 MTHFR-217ENST00000641820 1569 ntBASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 AC139887.3-201ENST00000568585 713 ntBASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 LINC01711-201ENST00000598340 967 ntBASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGB4Q9UN71 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 UPK3BP1-201ENST00000428678 509 ntBASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 AC013467.2-201ENST00000605472 835 ntBASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 AL139424.1-201ENST00000607572 797 ntBASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 AL732292.2-201ENST00000609649 430 ntBASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 AL139011.1-202ENST00000642063 584 ntBASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 AC006277.1-201ENST00000624348 1610 ntBASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB4Q9UN71 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.96■□□□□ 0.14
PCDHGB4Q9UN71 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGB4Q9UN71 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
PCDHGB4Q9UN71 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGB4Q9UN71 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGB4Q9UN71 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.14
PCDHGB4Q9UN71 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGB4Q9UN71 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms