Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
STAG3Q9UJ98 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC23.33■■□□□ 1.33
STAG3Q9UJ98 BCYRN1-201ENST00000418539 200 ntBASIC23.33■■□□□ 1.33
STAG3Q9UJ98 HIST3H2BA-201ENST00000436555 524 ntBASIC23.33■■□□□ 1.33
STAG3Q9UJ98 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC23.33■■□□□ 1.33
STAG3Q9UJ98 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC23.33■■□□□ 1.33
STAG3Q9UJ98 AC133539.2-201ENST00000604757 467 ntBASIC23.33■■□□□ 1.33
STAG3Q9UJ98 CU634019.7-201ENST00000624153 1185 ntBASIC23.33■■□□□ 1.33
STAG3Q9UJ98 FP236241.2-201ENST00000624906 1185 ntBASIC23.33■■□□□ 1.33
STAG3Q9UJ98 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
STAG3Q9UJ98 ABBA01031660.1-201ENST00000635219 756 ntBASIC23.33■■□□□ 1.33
STAG3Q9UJ98 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC23.33■■□□□ 1.33
STAG3Q9UJ98 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC23.33■■□□□ 1.33
STAG3Q9UJ98 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
STAG3Q9UJ98 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
STAG3Q9UJ98 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC23.33■■□□□ 1.32
STAG3Q9UJ98 AL136982.4-201ENST00000437689 1740 ntBASIC23.33■■□□□ 1.32
STAG3Q9UJ98 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.32
STAG3Q9UJ98 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC23.33■■□□□ 1.32
STAG3Q9UJ98 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
STAG3Q9UJ98 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 CYP4F24P-201ENST00000586049 1580 ntBASIC23.32■■□□□ 1.32
STAG3Q9UJ98 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 APOC3-202ENST00000375345 604 ntTSL 5 BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 AL162726.2-201ENST00000438986 1017 ntBASIC23.32■■□□□ 1.32
STAG3Q9UJ98 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 HNRNPA1P13-201ENST00000510646 963 ntBASIC23.32■■□□□ 1.32
STAG3Q9UJ98 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 TDH-203ENST00000531764 1110 ntBASIC23.32■■□□□ 1.32
STAG3Q9UJ98 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 AC036164.1-201ENST00000570544 333 ntBASIC23.32■■□□□ 1.32
STAG3Q9UJ98 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 AL022328.1-201ENST00000610050 478 ntBASIC23.32■■□□□ 1.32
STAG3Q9UJ98 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
STAG3Q9UJ98 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
STAG3Q9UJ98 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
STAG3Q9UJ98 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
STAG3Q9UJ98 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
STAG3Q9UJ98 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
STAG3Q9UJ98 AC067852.2-201ENST00000590513 2313 ntBASIC23.31■■□□□ 1.32
STAG3Q9UJ98 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
STAG3Q9UJ98 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
STAG3Q9UJ98 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
STAG3Q9UJ98 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
STAG3Q9UJ98 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
STAG3Q9UJ98 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
STAG3Q9UJ98 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC23.31■■□□□ 1.32
STAG3Q9UJ98 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC23.31■■□□□ 1.32
STAG3Q9UJ98 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC23.31■■□□□ 1.32
STAG3Q9UJ98 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC23.31■■□□□ 1.32
STAG3Q9UJ98 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC23.31■■□□□ 1.32
STAG3Q9UJ98 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC23.31■■□□□ 1.32
STAG3Q9UJ98 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
STAG3Q9UJ98 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
STAG3Q9UJ98 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
STAG3Q9UJ98 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
STAG3Q9UJ98 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
STAG3Q9UJ98 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
STAG3Q9UJ98 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
STAG3Q9UJ98 AL645728.1-201ENST00000366221 2101 ntBASIC23.3■■□□□ 1.32
STAG3Q9UJ98 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC23.3■■□□□ 1.32
STAG3Q9UJ98 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
STAG3Q9UJ98 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
STAG3Q9UJ98 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
STAG3Q9UJ98 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
STAG3Q9UJ98 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC23.3■■□□□ 1.32
STAG3Q9UJ98 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC23.3■■□□□ 1.32
STAG3Q9UJ98 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
STAG3Q9UJ98 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
STAG3Q9UJ98 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
STAG3Q9UJ98 AC099336.1-201ENST00000417053 1171 ntBASIC23.3■■□□□ 1.32
STAG3Q9UJ98 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC23.3■■□□□ 1.32
STAG3Q9UJ98 AL355994.2-201ENST00000447882 704 ntBASIC23.3■■□□□ 1.32
STAG3Q9UJ98 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC23.3■■□□□ 1.32
STAG3Q9UJ98 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
STAG3Q9UJ98 AP001002.2-201ENST00000625137 386 ntBASIC23.3■■□□□ 1.32
STAG3Q9UJ98 AC068587.10-201ENST00000641210 219 ntBASIC23.3■■□□□ 1.32
STAG3Q9UJ98 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms