Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP25Q9UHP3 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.84■□□□□ 0.61
USP25Q9UHP3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP25Q9UHP3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
USP25Q9UHP3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
USP25Q9UHP3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP25Q9UHP3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.84■□□□□ 0.61
USP25Q9UHP3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.84■□□□□ 0.61
USP25Q9UHP3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP25Q9UHP3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP25Q9UHP3 AC073621.1-201ENST00000392730 636 ntBASIC18.84■□□□□ 0.61
USP25Q9UHP3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.84■□□□□ 0.61
USP25Q9UHP3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.84■□□□□ 0.61
USP25Q9UHP3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.84■□□□□ 0.61
USP25Q9UHP3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.84■□□□□ 0.61
USP25Q9UHP3 AC136632.2-201ENST00000512891 861 ntBASIC18.84■□□□□ 0.61
USP25Q9UHP3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.84■□□□□ 0.61
USP25Q9UHP3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.84■□□□□ 0.61
USP25Q9UHP3 OR7E14P-202ENST00000530490 1290 ntBASIC18.84■□□□□ 0.61
USP25Q9UHP3 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.84■□□□□ 0.61
USP25Q9UHP3 AC005412.3-201ENST00000580309 715 ntBASIC18.84■□□□□ 0.61
USP25Q9UHP3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP25Q9UHP3 IFNL4P1-201ENST00000607083 540 ntBASIC18.84■□□□□ 0.61
USP25Q9UHP3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP25Q9UHP3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP25Q9UHP3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
USP25Q9UHP3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP25Q9UHP3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
USP25Q9UHP3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP25Q9UHP3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
USP25Q9UHP3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP25Q9UHP3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP25Q9UHP3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP25Q9UHP3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP25Q9UHP3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
USP25Q9UHP3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP25Q9UHP3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.83■□□□□ 0.61
USP25Q9UHP3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP25Q9UHP3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP25Q9UHP3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.83■□□□□ 0.61
USP25Q9UHP3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
USP25Q9UHP3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
USP25Q9UHP3 AC006449.6-201ENST00000612330 2296 ntBASIC18.83■□□□□ 0.61
USP25Q9UHP3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.83■□□□□ 0.6
USP25Q9UHP3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
USP25Q9UHP3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
USP25Q9UHP3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.83■□□□□ 0.6
USP25Q9UHP3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.83■□□□□ 0.6
USP25Q9UHP3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.83■□□□□ 0.6
USP25Q9UHP3 AC073648.2-201ENST00000510116 352 ntBASIC18.83■□□□□ 0.6
USP25Q9UHP3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.83■□□□□ 0.6
USP25Q9UHP3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.83■□□□□ 0.6
USP25Q9UHP3 CYP2A7P1-201ENST00000595391 815 ntBASIC18.83■□□□□ 0.6
USP25Q9UHP3 CLEC4GP1-201ENST00000596555 870 ntBASIC18.83■□□□□ 0.6
USP25Q9UHP3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.83■□□□□ 0.6
USP25Q9UHP3 AC008667.4-201ENST00000607370 168 ntBASIC18.83■□□□□ 0.6
USP25Q9UHP3 AP001350.2-201ENST00000625104 1094 ntBASIC18.83■□□□□ 0.6
USP25Q9UHP3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP25Q9UHP3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.83■□□□□ 0.6
USP25Q9UHP3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.83■□□□□ 0.6
USP25Q9UHP3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
USP25Q9UHP3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
USP25Q9UHP3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP25Q9UHP3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP25Q9UHP3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP25Q9UHP3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.83■□□□□ 0.6
USP25Q9UHP3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.83■□□□□ 0.6
USP25Q9UHP3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP25Q9UHP3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP25Q9UHP3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
USP25Q9UHP3 SLC22A20-204ENST00000530038 1673 ntBASIC18.82■□□□□ 0.6
USP25Q9UHP3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.82■□□□□ 0.6
USP25Q9UHP3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.82■□□□□ 0.6
USP25Q9UHP3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
USP25Q9UHP3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP25Q9UHP3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.82■□□□□ 0.6
USP25Q9UHP3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP25Q9UHP3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP25Q9UHP3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.82■□□□□ 0.6
USP25Q9UHP3 HCG4-201ENST00000418983 998 ntBASIC18.82■□□□□ 0.6
USP25Q9UHP3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.82■□□□□ 0.6
USP25Q9UHP3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
USP25Q9UHP3 PMS2P1-201ENST00000431037 1228 ntBASIC18.82■□□□□ 0.6
USP25Q9UHP3 AC087641.1-201ENST00000557561 1021 ntBASIC18.82■□□□□ 0.6
USP25Q9UHP3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.82■□□□□ 0.6
USP25Q9UHP3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP25Q9UHP3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP25Q9UHP3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP25Q9UHP3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP25Q9UHP3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
USP25Q9UHP3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
USP25Q9UHP3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
USP25Q9UHP3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
USP25Q9UHP3 PPT1-215ENST00000641471 2368 ntBASIC18.82■□□□□ 0.6
USP25Q9UHP3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.82■□□□□ 0.6
USP25Q9UHP3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP25Q9UHP3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP25Q9UHP3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP25Q9UHP3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.81■□□□□ 0.6
USP25Q9UHP3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms