Protein–RNA interactions for Protein: Q9P2J3

KLHL9, Kelch-like protein 9, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL9Q9P2J3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 AC105917.1-201ENST00000506637 2539 ntBASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 AL662844.4-201ENST00000606367 2838 ntBASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KLHL9Q9P2J3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 HMGA1P7-201ENST00000406908 502 ntBASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 AC112191.1-201ENST00000523689 701 ntBASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 MIR4492-201ENST00000581627 80 ntBASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 CYP2A7P1-201ENST00000595391 815 ntBASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 C20orf181-201ENST00000623918 480 ntBASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
KLHL9Q9P2J3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
KLHL9Q9P2J3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
KLHL9Q9P2J3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
KLHL9Q9P2J3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
KLHL9Q9P2J3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
KLHL9Q9P2J3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
KLHL9Q9P2J3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
KLHL9Q9P2J3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
KLHL9Q9P2J3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
KLHL9Q9P2J3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
KLHL9Q9P2J3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
KLHL9Q9P2J3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 AC002056.1-201ENST00000395613 760 ntBASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 AC140658.5-201ENST00000438532 169 ntBASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.95□□□□□ -0.02
KLHL9Q9P2J3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms