Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC24.63■■□□□ 1.53
SCAF1Q9H7N4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC24.63■■□□□ 1.53
SCAF1Q9H7N4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC24.63■■□□□ 1.53
SCAF1Q9H7N4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
SCAF1Q9H7N4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SCAF1Q9H7N4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SCAF1Q9H7N4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
SCAF1Q9H7N4 HCG11-201ENST00000411553 5696 ntBASIC24.63■■□□□ 1.53
SCAF1Q9H7N4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC24.63■■□□□ 1.53
SCAF1Q9H7N4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SCAF1Q9H7N4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SCAF1Q9H7N4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SCAF1Q9H7N4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 AC005014.3-201ENST00000605985 190 ntBASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 METTL15-211ENST00000634762 718 ntTSL 5 BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 TSPY26P-202ENST00000565928 3884 ntBASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 AC104581.4-201ENST00000623126 3052 ntBASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SCAF1Q9H7N4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 U91328.1-201ENST00000437528 223 ntBASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 DDX43P3-201ENST00000441064 443 ntBASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 GATB-205ENST00000508611 605 ntTSL 2 BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 NCF1C-201ENST00000438382 1427 ntBASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 AC092919.2-201ENST00000623631 1645 ntBASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 AC013470.3-201ENST00000420252 1194 ntBASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 SPDYE22P-201ENST00000582158 798 ntBASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SCAF1Q9H7N4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms