Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LHX5Q9H2C1 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.26■□□□□ 0.35
LHX5Q9H2C1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 IGHV3-62-201ENST00000520057 340 ntBASIC17.25■□□□□ 0.35
LHX5Q9H2C1 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 AC022145.2-201ENST00000598203 171 ntBASIC17.25■□□□□ 0.35
LHX5Q9H2C1 AL513210.1-201ENST00000629608 234 ntBASIC17.25■□□□□ 0.35
LHX5Q9H2C1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LHX5Q9H2C1 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 HMGN1P19-201ENST00000436976 333 ntBASIC17.24■□□□□ 0.35
LHX5Q9H2C1 AL592309.1-201ENST00000443127 649 ntBASIC17.24■□□□□ 0.35
LHX5Q9H2C1 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 AC069335.1-201ENST00000489972 472 ntBASIC17.24■□□□□ 0.35
LHX5Q9H2C1 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 PCDHA1-201ENST00000378133 2726 ntBASIC17.24■□□□□ 0.35
LHX5Q9H2C1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LHX5Q9H2C1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LHX5Q9H2C1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX5Q9H2C1 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.23■□□□□ 0.35
LHX5Q9H2C1 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
LHX5Q9H2C1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LHX5Q9H2C1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX5Q9H2C1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LHX5Q9H2C1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX5Q9H2C1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.23■□□□□ 0.35
LHX5Q9H2C1 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX5Q9H2C1 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX5Q9H2C1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX5Q9H2C1 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX5Q9H2C1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.23■□□□□ 0.35
LHX5Q9H2C1 FAM220BP-201ENST00000377689 816 ntBASIC17.23■□□□□ 0.35
LHX5Q9H2C1 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.23■□□□□ 0.35
LHX5Q9H2C1 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LHX5Q9H2C1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LHX5Q9H2C1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LHX5Q9H2C1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.23■□□□□ 0.35
LHX5Q9H2C1 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.23■□□□□ 0.35
LHX5Q9H2C1 AC061975.2-201ENST00000581722 295 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms