Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HERPUD2Q9BSE4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.97■□□□□ 0.31
HERPUD2Q9BSE4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HERPUD2Q9BSE4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HERPUD2Q9BSE4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HERPUD2Q9BSE4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.97■□□□□ 0.31
HERPUD2Q9BSE4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HERPUD2Q9BSE4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.97■□□□□ 0.31
HERPUD2Q9BSE4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
HERPUD2Q9BSE4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 AL591424.1-201ENST00000442569 1213 ntBASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 AC034105.1-201ENST00000563488 319 ntBASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 DBET-201ENST00000630918 3363 ntBASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.96■□□□□ 0.31
HERPUD2Q9BSE4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.96■□□□□ 0.3
HERPUD2Q9BSE4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HERPUD2Q9BSE4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.96■□□□□ 0.3
HERPUD2Q9BSE4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.96■□□□□ 0.3
HERPUD2Q9BSE4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.96■□□□□ 0.3
HERPUD2Q9BSE4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
HERPUD2Q9BSE4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 AC109635.5-201ENST00000533593 962 ntBASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 AC027601.4-201ENST00000611259 610 ntBASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 U82695.1-201ENST00000635752 1889 ntBASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HERPUD2Q9BSE4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms