Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VRK1Q99986 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VRK1Q99986 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
VRK1Q99986 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
VRK1Q99986 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
VRK1Q99986 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VRK1Q99986 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VRK1Q99986 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VRK1Q99986 AC025580.3-201ENST00000617932 1424 ntBASIC14.57□□□□□ -0.08
VRK1Q99986 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
VRK1Q99986 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VRK1Q99986 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VRK1Q99986 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.57□□□□□ -0.08
VRK1Q99986 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK1Q99986 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK1Q99986 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK1Q99986 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK1Q99986 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK1Q99986 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
VRK1Q99986 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK1Q99986 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK1Q99986 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VRK1Q99986 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.56□□□□□ -0.08
VRK1Q99986 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VRK1Q99986 AC116353.5-201ENST00000638148 1699 ntBASIC14.56□□□□□ -0.08
VRK1Q99986 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.56□□□□□ -0.08
VRK1Q99986 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VRK1Q99986 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
VRK1Q99986 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.56□□□□□ -0.08
VRK1Q99986 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
VRK1Q99986 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
VRK1Q99986 AL513480.1-201ENST00000451731 511 ntBASIC14.56□□□□□ -0.08
VRK1Q99986 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.56□□□□□ -0.08
VRK1Q99986 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.56□□□□□ -0.08
VRK1Q99986 KRT19P2-202ENST00000557173 1012 ntBASIC14.56□□□□□ -0.08
VRK1Q99986 SNHG9-202ENST00000564014 471 ntBASIC14.56□□□□□ -0.08
VRK1Q99986 OR7E47P-204ENST00000575924 449 ntBASIC14.56□□□□□ -0.08
VRK1Q99986 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.56□□□□□ -0.08
VRK1Q99986 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.56□□□□□ -0.08
VRK1Q99986 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.56□□□□□ -0.08
VRK1Q99986 C20orf181-201ENST00000623918 480 ntBASIC14.56□□□□□ -0.08
VRK1Q99986 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
VRK1Q99986 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK1Q99986 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VRK1Q99986 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.56□□□□□ -0.08
VRK1Q99986 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK1Q99986 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.56□□□□□ -0.08
VRK1Q99986 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK1Q99986 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK1Q99986 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK1Q99986 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
VRK1Q99986 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.56□□□□□ -0.08
VRK1Q99986 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK1Q99986 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.56□□□□□ -0.08
VRK1Q99986 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK1Q99986 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.56□□□□□ -0.08
VRK1Q99986 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK1Q99986 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.56□□□□□ -0.08
VRK1Q99986 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VRK1Q99986 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VRK1Q99986 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
VRK1Q99986 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VRK1Q99986 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VRK1Q99986 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.55□□□□□ -0.08
VRK1Q99986 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VRK1Q99986 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VRK1Q99986 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.55□□□□□ -0.08
VRK1Q99986 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VRK1Q99986 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VRK1Q99986 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
VRK1Q99986 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.55□□□□□ -0.08
VRK1Q99986 ALG1L5P-201ENST00000482043 771 ntBASIC14.55□□□□□ -0.08
VRK1Q99986 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.55□□□□□ -0.08
VRK1Q99986 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.55□□□□□ -0.08
VRK1Q99986 PDPK2P-202ENST00000562415 1191 ntBASIC14.55□□□□□ -0.08
VRK1Q99986 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.55□□□□□ -0.08
VRK1Q99986 MIR4469-201ENST00000583919 79 ntBASIC14.55□□□□□ -0.08
VRK1Q99986 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.55□□□□□ -0.08
VRK1Q99986 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.55□□□□□ -0.08
VRK1Q99986 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.55□□□□□ -0.08
VRK1Q99986 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
VRK1Q99986 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.55□□□□□ -0.08
VRK1Q99986 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VRK1Q99986 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VRK1Q99986 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VRK1Q99986 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VRK1Q99986 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VRK1Q99986 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
VRK1Q99986 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VRK1Q99986 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VRK1Q99986 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.55□□□□□ -0.08
VRK1Q99986 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VRK1Q99986 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VRK1Q99986 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VRK1Q99986 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VRK1Q99986 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
VRK1Q99986 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VRK1Q99986 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
VRK1Q99986 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.54□□□□□ -0.08
VRK1Q99986 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms