Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCL13Q99616 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL13Q99616 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.74□□□□□ -0.21
CCL13Q99616 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL13Q99616 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CCL13Q99616 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCL13Q99616 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL13Q99616 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL13Q99616 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CCL13Q99616 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL13Q99616 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCL13Q99616 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL13Q99616 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL13Q99616 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL13Q99616 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
CCL13Q99616 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCL13Q99616 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CCL13Q99616 SPCS2P4-201ENST00000436160 681 ntBASIC13.74□□□□□ -0.21
CCL13Q99616 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.74□□□□□ -0.21
CCL13Q99616 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.74□□□□□ -0.21
CCL13Q99616 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.74□□□□□ -0.21
CCL13Q99616 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.74□□□□□ -0.21
CCL13Q99616 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL13Q99616 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.74□□□□□ -0.21
CCL13Q99616 AC022145.2-201ENST00000598203 171 ntBASIC13.74□□□□□ -0.21
CCL13Q99616 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.74□□□□□ -0.21
CCL13Q99616 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.74□□□□□ -0.21
CCL13Q99616 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.74□□□□□ -0.21
CCL13Q99616 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.74□□□□□ -0.21
CCL13Q99616 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL13Q99616 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL13Q99616 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL13Q99616 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.74□□□□□ -0.21
CCL13Q99616 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
CCL13Q99616 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
CCL13Q99616 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
CCL13Q99616 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CCL13Q99616 UXT-AS1-201ENST00000590504 1525 ntBASIC13.74□□□□□ -0.21
CCL13Q99616 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL13Q99616 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCL13Q99616 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL13Q99616 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL13Q99616 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL13Q99616 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL13Q99616 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL13Q99616 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL13Q99616 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL13Q99616 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL13Q99616 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.73□□□□□ -0.21
CCL13Q99616 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CCL13Q99616 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CCL13Q99616 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL13Q99616 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.73□□□□□ -0.21
CCL13Q99616 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CCL13Q99616 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL13Q99616 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL13Q99616 AC004461.1-201ENST00000412461 403 ntBASIC13.73□□□□□ -0.21
CCL13Q99616 AC005237.2-201ENST00000434368 219 ntBASIC13.73□□□□□ -0.21
CCL13Q99616 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
CCL13Q99616 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
CCL13Q99616 POU5F1P6-201ENST00000466990 990 ntBASIC13.73□□□□□ -0.21
CCL13Q99616 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CCL13Q99616 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.73□□□□□ -0.21
CCL13Q99616 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
CCL13Q99616 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.73□□□□□ -0.21
CCL13Q99616 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL13Q99616 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CCL13Q99616 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CCL13Q99616 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
CCL13Q99616 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.73□□□□□ -0.21
CCL13Q99616 SNHG9-202ENST00000564014 471 ntBASIC13.73□□□□□ -0.21
CCL13Q99616 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.73□□□□□ -0.21
CCL13Q99616 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.73□□□□□ -0.21
CCL13Q99616 AC008267.7-201ENST00000624570 1194 ntBASIC13.73□□□□□ -0.21
CCL13Q99616 AL513210.1-201ENST00000629608 234 ntBASIC13.73□□□□□ -0.21
CCL13Q99616 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.73□□□□□ -0.21
CCL13Q99616 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL13Q99616 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CCL13Q99616 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL13Q99616 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
CCL13Q99616 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL13Q99616 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CCL13Q99616 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.73□□□□□ -0.21
CCL13Q99616 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.73□□□□□ -0.21
CCL13Q99616 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL13Q99616 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CCL13Q99616 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL13Q99616 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL13Q99616 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL13Q99616 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL13Q99616 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.73□□□□□ -0.21
CCL13Q99616 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.73□□□□□ -0.21
CCL13Q99616 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL13Q99616 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL13Q99616 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL13Q99616 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL13Q99616 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CCL13Q99616 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL13Q99616 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL13Q99616 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms