Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 SNORA78-201ENST00000459373 127 ntBASIC15.49■□□□□ 0.07
NR1H4Q96RI1 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 C2orf69P3-201ENST00000565542 1120 ntBASIC15.49■□□□□ 0.07
NR1H4Q96RI1 AC019129.2-201ENST00000609837 1235 ntBASIC15.49■□□□□ 0.07
NR1H4Q96RI1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 TMEM191A-211ENST00000637163 1067 ntBASIC15.49■□□□□ 0.07
NR1H4Q96RI1 AP006294.2-201ENST00000641667 209 ntBASIC15.49■□□□□ 0.07
NR1H4Q96RI1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NR1H4Q96RI1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 DUX4L17-201ENST00000557360 1267 ntBASIC15.48■□□□□ 0.07
NR1H4Q96RI1 FITM1-202ENST00000559294 800 ntBASIC15.48■□□□□ 0.07
NR1H4Q96RI1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 AC013467.2-201ENST00000605472 835 ntBASIC15.48■□□□□ 0.07
NR1H4Q96RI1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms