Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEK1Q96PY6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.38■□□□□ 0.69
NEK1Q96PY6 TFAMP1-201ENST00000412727 736 ntBASIC19.38■□□□□ 0.69
NEK1Q96PY6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.38■□□□□ 0.69
NEK1Q96PY6 AKAP8P1-201ENST00000434743 1349 ntBASIC19.38■□□□□ 0.69
NEK1Q96PY6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.38■□□□□ 0.69
NEK1Q96PY6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.38■□□□□ 0.69
NEK1Q96PY6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.38■□□□□ 0.69
NEK1Q96PY6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NEK1Q96PY6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.38■□□□□ 0.69
NEK1Q96PY6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
NEK1Q96PY6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEK1Q96PY6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.38■□□□□ 0.69
NEK1Q96PY6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.38■□□□□ 0.69
NEK1Q96PY6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.38■□□□□ 0.69
NEK1Q96PY6 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
NEK1Q96PY6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NEK1Q96PY6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.38■□□□□ 0.69
NEK1Q96PY6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.38■□□□□ 0.69
NEK1Q96PY6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.38■□□□□ 0.69
NEK1Q96PY6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.38■□□□□ 0.69
NEK1Q96PY6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
NEK1Q96PY6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NEK1Q96PY6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEK1Q96PY6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEK1Q96PY6 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NEK1Q96PY6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.38■□□□□ 0.69
NEK1Q96PY6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.38■□□□□ 0.69
NEK1Q96PY6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NEK1Q96PY6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEK1Q96PY6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
NEK1Q96PY6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEK1Q96PY6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEK1Q96PY6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.37■□□□□ 0.69
NEK1Q96PY6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
NEK1Q96PY6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NEK1Q96PY6 AL589702.1-201ENST00000641229 1509 ntBASIC19.37■□□□□ 0.69
NEK1Q96PY6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEK1Q96PY6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.37■□□□□ 0.69
NEK1Q96PY6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEK1Q96PY6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEK1Q96PY6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEK1Q96PY6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NEK1Q96PY6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NEK1Q96PY6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEK1Q96PY6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NEK1Q96PY6 ADH5P3-201ENST00000433842 1137 ntBASIC19.37■□□□□ 0.69
NEK1Q96PY6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEK1Q96PY6 AL135744.1-201ENST00000565098 629 ntBASIC19.37■□□□□ 0.69
NEK1Q96PY6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.37■□□□□ 0.69
NEK1Q96PY6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.37■□□□□ 0.69
NEK1Q96PY6 MTDHP5-201ENST00000598980 586 ntBASIC19.37■□□□□ 0.69
NEK1Q96PY6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NEK1Q96PY6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.37■□□□□ 0.69
NEK1Q96PY6 C20orf181-201ENST00000623918 480 ntBASIC19.37■□□□□ 0.69
NEK1Q96PY6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.37■□□□□ 0.69
NEK1Q96PY6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEK1Q96PY6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
NEK1Q96PY6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NEK1Q96PY6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
NEK1Q96PY6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NEK1Q96PY6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEK1Q96PY6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.37■□□□□ 0.69
NEK1Q96PY6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.36■□□□□ 0.69
NEK1Q96PY6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEK1Q96PY6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEK1Q96PY6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
NEK1Q96PY6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.36■□□□□ 0.69
NEK1Q96PY6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.36■□□□□ 0.69
NEK1Q96PY6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.36■□□□□ 0.69
NEK1Q96PY6 AC010491.1-201ENST00000563101 2797 ntBASIC19.36■□□□□ 0.69
NEK1Q96PY6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
NEK1Q96PY6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEK1Q96PY6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEK1Q96PY6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NEK1Q96PY6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NEK1Q96PY6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NEK1Q96PY6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
NEK1Q96PY6 YBX2P1-201ENST00000394192 760 ntBASIC19.36■□□□□ 0.69
NEK1Q96PY6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEK1Q96PY6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NEK1Q96PY6 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.36■□□□□ 0.69
NEK1Q96PY6 AC073389.1-201ENST00000595595 795 ntBASIC19.36■□□□□ 0.69
NEK1Q96PY6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.36■□□□□ 0.69
NEK1Q96PY6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.36■□□□□ 0.69
NEK1Q96PY6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEK1Q96PY6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.36■□□□□ 0.69
NEK1Q96PY6 AC008894.3-201ENST00000624324 3103 ntBASIC19.36■□□□□ 0.69
NEK1Q96PY6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
NEK1Q96PY6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NEK1Q96PY6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NEK1Q96PY6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.36■□□□□ 0.69
NEK1Q96PY6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEK1Q96PY6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEK1Q96PY6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NEK1Q96PY6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.36■□□□□ 0.69
NEK1Q96PY6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEK1Q96PY6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEK1Q96PY6 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.36■□□□□ 0.69
NEK1Q96PY6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms