Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 BTBD7P1-201ENST00000447253 1453 ntBASIC16.4■□□□□ 0.22
SIPA1Q96FS4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.4■□□□□ 0.22
SIPA1Q96FS4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SIPA1Q96FS4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
SIPA1Q96FS4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.39■□□□□ 0.22
SIPA1Q96FS4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 SERBP1P3-201ENST00000459980 809 ntBASIC16.39■□□□□ 0.21
SIPA1Q96FS4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 ZNF890P-202ENST00000530367 1156 ntBASIC16.39■□□□□ 0.21
SIPA1Q96FS4 AC061975.2-201ENST00000581722 295 ntBASIC16.39■□□□□ 0.21
SIPA1Q96FS4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SIPA1Q96FS4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 AL353779.1-201ENST00000434793 351 ntBASIC16.38■□□□□ 0.21
SIPA1Q96FS4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.38■□□□□ 0.21
SIPA1Q96FS4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 GGT4P-201ENST00000623672 1708 ntBASIC16.38■□□□□ 0.21
SIPA1Q96FS4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 AC006538.1-201ENST00000567905 1585 ntBASIC16.38■□□□□ 0.21
SIPA1Q96FS4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SIPA1Q96FS4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIPA1Q96FS4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.37■□□□□ 0.21
SIPA1Q96FS4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIPA1Q96FS4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
SIPA1Q96FS4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.37■□□□□ 0.21
SIPA1Q96FS4 AL603756.1-201ENST00000606511 2163 ntBASIC16.37■□□□□ 0.21
SIPA1Q96FS4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIPA1Q96FS4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.37■□□□□ 0.21
SIPA1Q96FS4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIPA1Q96FS4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.37■□□□□ 0.21
SIPA1Q96FS4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIPA1Q96FS4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SIPA1Q96FS4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms