Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RAPGEF4Q8WZA2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
RAPGEF4Q8WZA2 CLK3P2-201ENST00000427566 1453 ntBASIC21.29■■□□□ 1
RAPGEF4Q8WZA2 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC21.29■■□□□ 1
RAPGEF4Q8WZA2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RAPGEF4Q8WZA2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC21.29■■□□□ 1
RAPGEF4Q8WZA2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC21.29■■□□□ 1
RAPGEF4Q8WZA2 FXR1-221ENST00000491674 365 ntTSL 2 BASIC21.29■■□□□ 1
RAPGEF4Q8WZA2 AC104596.2-201ENST00000512793 793 ntBASIC21.29■■□□□ 1
RAPGEF4Q8WZA2 AL033527.5-201ENST00000641382 801 ntBASIC21.29■■□□□ 1
RAPGEF4Q8WZA2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.29■■□□□ 1
RAPGEF4Q8WZA2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAPGEF4Q8WZA2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RAPGEF4Q8WZA2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAPGEF4Q8WZA2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAPGEF4Q8WZA2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RAPGEF4Q8WZA2 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
RAPGEF4Q8WZA2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC21.28■■□□□ 1
RAPGEF4Q8WZA2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RAPGEF4Q8WZA2 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAPGEF4Q8WZA2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAPGEF4Q8WZA2 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RAPGEF4Q8WZA2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC21.28■■□□□ 1
RAPGEF4Q8WZA2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAPGEF4Q8WZA2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC21.28■■□□□ 1
RAPGEF4Q8WZA2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAPGEF4Q8WZA2 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAPGEF4Q8WZA2 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAPGEF4Q8WZA2 AC234783.1-201ENST00000441761 496 ntBASIC21.28■■□□□ 1
RAPGEF4Q8WZA2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC21.28■■□□□ 1
RAPGEF4Q8WZA2 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC21.28■■□□□ 1
RAPGEF4Q8WZA2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC21.28■■□□□ 1
RAPGEF4Q8WZA2 CDC14C-201ENST00000428251 1719 ntBASIC21.28■■□□□ 1
RAPGEF4Q8WZA2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAPGEF4Q8WZA2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
RAPGEF4Q8WZA2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
RAPGEF4Q8WZA2 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAPGEF4Q8WZA2 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAPGEF4Q8WZA2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAPGEF4Q8WZA2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC21.27■■□□□ 1
RAPGEF4Q8WZA2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAPGEF4Q8WZA2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RAPGEF4Q8WZA2 NSL1-201ENST00000366976 722 ntTSL 2 BASIC21.27■■□□□ 1
RAPGEF4Q8WZA2 AC022494.1-201ENST00000466044 728 ntBASIC21.27■■□□□ 1
RAPGEF4Q8WZA2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC21.27■■□□□ 1
RAPGEF4Q8WZA2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
RAPGEF4Q8WZA2 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RAPGEF4Q8WZA2 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC21.27■■□□□ 1
RAPGEF4Q8WZA2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC21.27■■□□□ 1
RAPGEF4Q8WZA2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.27■■□□□ 1
RAPGEF4Q8WZA2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC21.27■■□□□ 1
RAPGEF4Q8WZA2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RAPGEF4Q8WZA2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RAPGEF4Q8WZA2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC21.27■□□□□ 0.99
RAPGEF4Q8WZA2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
RAPGEF4Q8WZA2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAPGEF4Q8WZA2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC21.25■□□□□ 0.99
RAPGEF4Q8WZA2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAPGEF4Q8WZA2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RAPGEF4Q8WZA2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAPGEF4Q8WZA2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RAPGEF4Q8WZA2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAPGEF4Q8WZA2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAPGEF4Q8WZA2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.25■□□□□ 0.99
RAPGEF4Q8WZA2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAPGEF4Q8WZA2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms