Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 KSR1-207ENST00000578981 748 ntTSL 4 BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 AC138649.2-201ENST00000615886 705 ntBASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 AC015818.8-201ENST00000587907 1519 ntBASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 AMT-206ENST00000458307 1860 ntTSL 2 BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 AC104982.3-201ENST00000581995 514 ntBASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 AC006453.4-201ENST00000636949 1252 ntBASIC21.37■■□□□ 1.01
COL22A1Q8NFW1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
COL22A1Q8NFW1 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL22A1Q8NFW1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL22A1Q8NFW1 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC21.36■■□□□ 1.01
COL22A1Q8NFW1 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC21.36■■□□□ 1.01
COL22A1Q8NFW1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL22A1Q8NFW1 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
COL22A1Q8NFW1 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC21.36■■□□□ 1.01
COL22A1Q8NFW1 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC21.36■■□□□ 1.01
COL22A1Q8NFW1 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL22A1Q8NFW1 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC21.36■■□□□ 1.01
COL22A1Q8NFW1 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL22A1Q8NFW1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.36■■□□□ 1.01
COL22A1Q8NFW1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL22A1Q8NFW1 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL22A1Q8NFW1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL22A1Q8NFW1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 GGT3P-204ENST00000453783 1664 ntBASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 LBH-202ENST00000401506 485 ntTSL 3 BASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 HLA-DQB2-229ENST00000411527 1059 ntBASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 GPX4-206ENST00000588919 803 ntTSL 2 BASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 KLK3-207ENST00000595952 969 ntTSL 3 BASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
COL22A1Q8NFW1 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL22A1Q8NFW1 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL22A1Q8NFW1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL22A1Q8NFW1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
COL22A1Q8NFW1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL22A1Q8NFW1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL22A1Q8NFW1 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL22A1Q8NFW1 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC21.34■■□□□ 1.01
COL22A1Q8NFW1 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL22A1Q8NFW1 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC21.34■■□□□ 1.01
COL22A1Q8NFW1 RN7SL720P-201ENST00000488178 304 ntBASIC21.34■■□□□ 1.01
COL22A1Q8NFW1 AC245884.6-201ENST00000515672 1067 ntBASIC21.34■■□□□ 1.01
COL22A1Q8NFW1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC21.34■■□□□ 1.01
COL22A1Q8NFW1 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC21.34■■□□□ 1.01
COL22A1Q8NFW1 RN7SL574P-201ENST00000581512 297 ntBASIC21.34■■□□□ 1.01
COL22A1Q8NFW1 NKG7-204ENST00000595217 816 ntTSL 2 BASIC21.34■■□□□ 1.01
COL22A1Q8NFW1 AP003419.4-201ENST00000616071 517 ntBASIC21.34■■□□□ 1.01
COL22A1Q8NFW1 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC21.34■■□□□ 1.01
COL22A1Q8NFW1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.34■■□□□ 1.01
COL22A1Q8NFW1 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL22A1Q8NFW1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.34■■□□□ 1.01
COL22A1Q8NFW1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
COL22A1Q8NFW1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC21.33■■□□□ 1.01
COL22A1Q8NFW1 CROCCP2-202ENST00000412962 2773 ntBASIC21.33■■□□□ 1.01
COL22A1Q8NFW1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
COL22A1Q8NFW1 ACTBP8-201ENST00000403258 1108 ntBASIC21.33■■□□□ 1.01
COL22A1Q8NFW1 PTPA-218ENST00000435132 618 ntTSL 2 BASIC21.33■■□□□ 1.01
COL22A1Q8NFW1 FTLP1-201ENST00000449155 526 ntBASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms