Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS37AQ8NEZ2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 MRPL20P1-201ENST00000400819 433 ntBASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 AC105339.3-201ENST00000560043 636 ntBASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 IFNL4P1-201ENST00000607083 540 ntBASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS37AQ8NEZ2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 REXO1L8P-201ENST00000604378 1897 ntBASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 AL356488.2-201ENST00000602755 427 ntBASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.68■□□□□ 0.1
VPS37AQ8NEZ2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms