Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 MIR943-201ENST00000401286 94 ntBASIC16.72■□□□□ 0.27
KDM1BQ8NB78 FAM8A3P-201ENST00000427218 844 ntBASIC16.72■□□□□ 0.27
KDM1BQ8NB78 BASP1P1-201ENST00000430708 665 ntBASIC16.72■□□□□ 0.27
KDM1BQ8NB78 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 BCRP1-201ENST00000444246 691 ntBASIC16.72■□□□□ 0.27
KDM1BQ8NB78 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 AC092364.2-202ENST00000597012 1073 ntBASIC16.72■□□□□ 0.27
KDM1BQ8NB78 AL390955.2-201ENST00000603032 514 ntBASIC16.72■□□□□ 0.27
KDM1BQ8NB78 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
KDM1BQ8NB78 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 AL162727.3-201ENST00000635661 2787 ntBASIC16.71■□□□□ 0.27
KDM1BQ8NB78 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 AC069120.2-201ENST00000524091 540 ntBASIC16.71■□□□□ 0.27
KDM1BQ8NB78 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.71■□□□□ 0.27
KDM1BQ8NB78 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.71■□□□□ 0.27
KDM1BQ8NB78 AC008741.2-201ENST00000612792 3115 ntBASIC16.71■□□□□ 0.27
KDM1BQ8NB78 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KDM1BQ8NB78 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.71■□□□□ 0.26
KDM1BQ8NB78 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.71■□□□□ 0.26
KDM1BQ8NB78 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 GPAA1P2-202ENST00000606848 1787 ntBASIC16.7■□□□□ 0.26
KDM1BQ8NB78 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 AL035456.1-201ENST00000456064 1369 ntBASIC16.7■□□□□ 0.26
KDM1BQ8NB78 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 MIR4453-201ENST00000584019 89 ntBASIC16.7■□□□□ 0.26
KDM1BQ8NB78 AJ011932.1-201ENST00000621707 465 ntBASIC16.7■□□□□ 0.26
KDM1BQ8NB78 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms