Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 ALG1L8P-201ENST00000533887 760 ntBASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 AL365330.1-201ENST00000607459 531 ntBASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC4Q8N9L1 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 AL139400.1-201ENST00000366220 510 ntBASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 MIR4321-201ENST00000592276 80 ntBASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 GPALPP1-207ENST00000611650 899 ntBASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
ZIC4Q8N9L1 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
ZIC4Q8N9L1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.46□□□□□ -0.1
ZIC4Q8N9L1 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.1
ZIC4Q8N9L1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.46□□□□□ -0.1
ZIC4Q8N9L1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.46□□□□□ -0.1
ZIC4Q8N9L1 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 AC011270.2-201ENST00000624293 2550 ntBASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 HLA-H-201ENST00000383620 1096 ntBASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 RBPMS2P1-201ENST00000437762 623 ntBASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 RARRES2P9-201ENST00000565168 469 ntBASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms