Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
APLFQ8IW19 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
APLFQ8IW19 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
APLFQ8IW19 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
APLFQ8IW19 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
APLFQ8IW19 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
APLFQ8IW19 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
APLFQ8IW19 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
APLFQ8IW19 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
APLFQ8IW19 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
APLFQ8IW19 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
APLFQ8IW19 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
APLFQ8IW19 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
APLFQ8IW19 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
APLFQ8IW19 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
APLFQ8IW19 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
APLFQ8IW19 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
APLFQ8IW19 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
APLFQ8IW19 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
APLFQ8IW19 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
APLFQ8IW19 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
APLFQ8IW19 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
APLFQ8IW19 AC211486.1-202ENST00000416371 468 ntBASIC16.35■□□□□ 0.21
APLFQ8IW19 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.35■□□□□ 0.21
APLFQ8IW19 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.35■□□□□ 0.21
APLFQ8IW19 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.35■□□□□ 0.21
APLFQ8IW19 AC211476.1-201ENST00000503899 468 ntBASIC16.35■□□□□ 0.21
APLFQ8IW19 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.35■□□□□ 0.21
APLFQ8IW19 AC027796.2-201ENST00000575326 344 ntBASIC16.35■□□□□ 0.21
APLFQ8IW19 AC116407.2-201ENST00000613639 860 ntBASIC16.35■□□□□ 0.21
APLFQ8IW19 AC073592.5-201ENST00000624854 528 ntBASIC16.35■□□□□ 0.21
APLFQ8IW19 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
APLFQ8IW19 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.35■□□□□ 0.21
APLFQ8IW19 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
APLFQ8IW19 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.35■□□□□ 0.21
APLFQ8IW19 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
APLFQ8IW19 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.35■□□□□ 0.21
APLFQ8IW19 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
APLFQ8IW19 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
APLFQ8IW19 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
APLFQ8IW19 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
APLFQ8IW19 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
APLFQ8IW19 KRT8P47-201ENST00000604727 1398 ntBASIC16.35■□□□□ 0.21
APLFQ8IW19 AC002310.6-201ENST00000624451 1377 ntBASIC16.35■□□□□ 0.21
APLFQ8IW19 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
APLFQ8IW19 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
APLFQ8IW19 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.35■□□□□ 0.21
APLFQ8IW19 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
APLFQ8IW19 RNF216P1-203ENST00000404404 2427 ntBASIC16.35■□□□□ 0.21
APLFQ8IW19 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
APLFQ8IW19 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
APLFQ8IW19 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.35■□□□□ 0.21
APLFQ8IW19 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.35■□□□□ 0.21
APLFQ8IW19 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC16.35■□□□□ 0.21
APLFQ8IW19 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.34■□□□□ 0.21
APLFQ8IW19 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
APLFQ8IW19 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.34■□□□□ 0.21
APLFQ8IW19 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
APLFQ8IW19 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
APLFQ8IW19 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
APLFQ8IW19 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
APLFQ8IW19 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.34■□□□□ 0.21
APLFQ8IW19 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
APLFQ8IW19 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.34■□□□□ 0.21
APLFQ8IW19 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
APLFQ8IW19 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
APLFQ8IW19 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
APLFQ8IW19 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
APLFQ8IW19 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
APLFQ8IW19 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
APLFQ8IW19 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.34■□□□□ 0.21
APLFQ8IW19 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
APLFQ8IW19 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
APLFQ8IW19 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
APLFQ8IW19 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
APLFQ8IW19 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
APLFQ8IW19 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
APLFQ8IW19 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.34■□□□□ 0.21
APLFQ8IW19 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.34■□□□□ 0.21
APLFQ8IW19 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.34■□□□□ 0.21
APLFQ8IW19 AL020989.1-201ENST00000422979 469 ntBASIC16.34■□□□□ 0.21
APLFQ8IW19 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.34■□□□□ 0.21
APLFQ8IW19 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.34■□□□□ 0.21
APLFQ8IW19 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
APLFQ8IW19 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.34■□□□□ 0.21
APLFQ8IW19 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.34■□□□□ 0.21
APLFQ8IW19 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.34■□□□□ 0.21
APLFQ8IW19 AC004706.3-202ENST00000621574 984 ntBASIC16.34■□□□□ 0.21
APLFQ8IW19 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.34■□□□□ 0.21
APLFQ8IW19 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
APLFQ8IW19 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.34■□□□□ 0.21
APLFQ8IW19 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
APLFQ8IW19 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
APLFQ8IW19 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
APLFQ8IW19 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.34■□□□□ 0.21
APLFQ8IW19 AC004817.3-201ENST00000602957 2129 ntBASIC16.34■□□□□ 0.21
APLFQ8IW19 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
APLFQ8IW19 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
APLFQ8IW19 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
APLFQ8IW19 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms